BMRB Entry 11280

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PDB ID: 2dzj
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR11280
MolProbity Validation Chart

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Title:
2DZJ/Solution Structure of the N-terminal Ubiquitin-like Domain in Human Synaptic Glycoprotein SC2
Deposition date:
2010-08-09
Original release date:
2011-08-18
Authors:
Zhao, C.; Yoneyama, M.; Koshiba, S.; Watanabe, S.; Harada, T.; Kigawa, T.; Yokoyama, S.
Citation:

Citation: Zhao, C.; Yoneyama, M.; Koshiba, S.; Watanabe, S.; Harada, T.; Kigawa, T.; Yokoyama, S.. "2DZJ/Solution Structure of the N-terminal Ubiquitin-like Domain in Human Synaptic Glycoprotein SC2"  .

Assembly members:

Assembly members:
ubiquitin-like domain, polymer, 88 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:

Experimental source:   Production method: cell free synthesis   Host organism: E. coli - cell free   Vector: P060522-14

Entity Sequences (FASTA):

Entity Sequences (FASTA):
ubiquitin-like domain: GSSGSSGMKHYEVEILDAKT REKLCFLDKVEPHATIAEIK NLFTKTHPQWYPARQSLRLD PKGKSLKDEDVLQKLPVGTT ATLYFRDL

Data sets:
Data typeCount
13C chemical shifts393
15N chemical shifts82
1H chemical shifts602

Additional metadata:

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  • Samples and Experiments
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Assembly:

Entity Assembly IDEntity NameEntity ID
1ubiquitin-like domain1

Entities:

Entity 1, ubiquitin-like domain 88 residues - Formula weight is not available

1   GLYSERSERGLYSERSERGLYMETLYSHIS
2   TYRGLUVALGLUILELEUASPALALYSTHR
3   ARGGLULYSLEUCYSPHELEUASPLYSVAL
4   GLUPROHISALATHRILEALAGLUILELYS
5   ASNLEUPHETHRLYSTHRHISPROGLNTRP
6   TYRPROALAARGGLNSERLEUARGLEUASP
7   PROLYSGLYLYSSERLEULYSASPGLUASP
8   VALLEUGLNLYSLEUPROVALGLYTHRTHR
9   ALATHRLEUTYRPHEARGASPLEU

Related Database Links:

PDB 2DZJ
DBJ BAE88553 BAE90144 BAG37802 BAG50909 BAI47191
EMBL CAG33173
GB AAF32373 AAH00174 AAH02425 AAH05952 AAH07801
REF NP_001029920 NP_001231519 NP_001270331 NP_612510 XP_001498421
SP Q3ZCD7 Q9NZ01
TPG DAA28092
AlphaFold Q3ZCD7 Q9NZ01

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks