BMRB Entry 11454

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR11454

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Title:
NMR Chemical Shift Assignments for QB domain of Sp1
Deposition date:
2011-09-26
Original release date:
2012-12-06
Authors:
Hiramatsu, Naoko; Hibino, Emi; Matsuzaki, Katsumi; Kuwahara, Jun; Hoshino, Masaru
Citation:

Citation: Hiramatsu, Naoko; Hibino, Emi; Matsuzaki, Katsumi; Kuwahara, Jun; Hoshino, Masaru. "Interaction between isolated transcriptional activation domains of Sp1 revealed by heteronuclear magnetic resonance"  Protein Sci. 21, 1481-1488 (2012).
PubMed: 22855260

Assembly members:

Assembly members:
QB domain of Sp1, polymer, 172 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: pGEX1

Entity Sequences (FASTA):

Entity Sequences (FASTA):
QB domain of Sp1: GILTNSQGQTPQRVSGLQGS DALNIQQNQTSGGSLQAGQQ KEGEQNQQTQQQQILIQPQL VQGGQALQALQAAPLSGQTF TTQAISQETLQNLQLQAVPN SGPIIIRTPTVGPNGQVSWQ TLQLQNLQVQNPQAQTITLA PMQGVSLGQTPGGTLEDYKD DDDKGSHHHHHH

Data sets:
Data typeCount
13C chemical shifts304
15N chemical shifts143
1H chemical shifts143

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1QB domain of Sp11

Entities:

Entity 1, QB domain of Sp1 172 residues - Formula weight is not available

1   GLYILELEUTHRASNSERGLNGLYGLNTHR
2   PROGLNARGVALSERGLYLEUGLNGLYSER
3   ASPALALEUASNILEGLNGLNASNGLNTHR
4   SERGLYGLYSERLEUGLNALAGLYGLNGLN
5   LYSGLUGLYGLUGLNASNGLNGLNTHRGLN
6   GLNGLNGLNILELEUILEGLNPROGLNLEU
7   VALGLNGLYGLYGLNALALEUGLNALALEU
8   GLNALAALAPROLEUSERGLYGLNTHRPHE
9   THRTHRGLNALAILESERGLNGLUTHRLEU
10   GLNASNLEUGLNLEUGLNALAVALPROASN
11   SERGLYPROILEILEILEARGTHRPROTHR
12   VALGLYPROASNGLYGLNVALSERTRPGLN
13   THRLEUGLNLEUGLNASNLEUGLNVALGLN
14   ASNPROGLNALAGLNTHRILETHRLEUALA
15   PROMETGLNGLYVALSERLEUGLYGLNTHR
16   PROGLYGLYTHRLEUGLUASPTYRLYSASP
17   ASPASPASPLYSGLYSERHISHISHISHIS
18   HISHIS

Related Database Links:

DBJ BAB13476 BAD92915 BAI46444
EMBL CBM42955
GB AAA61154 AAF67726 AAH43224 AAH62539 ADL59934
REF NP_001238754 NP_001253853 NP_001272689 NP_003100 NP_612482
SP P08047
AlphaFold P08047

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks