BMRB Entry 11540

Name: Solution structure of esf3
Published: 2014-04-22

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PDB ID: 2ru1
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR11540
MolProbity Validation Chart

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Solution structure of esf3

Deposition date:

2013-11-05

Original release date:

2014-04-22

Authors:

Umetsu, Yoshitaka; Mori, Masashi; Ohki, Shinya

Citation:

Citation: Costa, Liliana; Marshall, Eleanor; Tesfaye, Mesfin; Silverstein, Kevin; Mori, Masashi; Umetsu, Yoshitaka; Otterbach, Sophie; Papareddy, Ranjith; Dickinson, Hugh; Boutiller, Kim; VandenBosch, Kathryn; Ohki, Shinya; Gutierrez-Marcos, Jose. "Central cell-derived peptides regulate early embryo patterning in flowering plants" Science 344, 168-172 (2014).
PubMed: 24723605

Assembly members:

Assembly members:
entity, polymer, 70 residues, 7976.471 Da.

Natural source:

Natural source: Common Name: Thale cress Taxonomy ID: 3702 Superkingdom: Eukaryota Kingdom: Viridiplantae Genus/species: Arabidopsis thaliana

Experimental source:

Experimental source: Production method: recombinant technology Host organism: TOMATO MOSAIC VIRUS Vector: PBICER8-C0.3-HUIFN-G-SRZ

Entity Sequences (FASTA):

Entity Sequences (FASTA):
entity: GPEKMEVKEIGRSSKIILPA CMHETCSGGFSLKNDCWCCL RLKTKQARCWKEKEFPNAKE LCFANCPPLE

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	177
15N chemical shifts	68
1H chemical shifts	421

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	entity	1

Entities:

Entity 1, entity 70 residues - 7976.471 Da.

1	GLY	PRO	GLU	LYS	MET	GLU	VAL	LYS	GLU	ILE
2	GLY	ARG	SER	SER	LYS	ILE	ILE	LEU	PRO	ALA
3	CYS	MET	HIS	GLU	THR	CYS	SER	GLY	GLY	PHE
4	SER	LEU	LYS	ASN	ASP	CYS	TRP	CYS	CYS	LEU
5	ARG	LEU	LYS	THR	LYS	GLN	ALA	ARG	CYS	TRP
6	LYS	GLU	LYS	GLU	PHE	PRO	ASN	ALA	LYS	GLU
7	LEU	CYS	PHE	ALA	ASN	CYS	PRO	PRO	LEU	GLU

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
3D 1H-15N NOESY	sample_1	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_1	isotropic	sample_conditions_1
3D HNCACB	sample_1	isotropic	sample_conditions_1
3D C(CO)NH	sample_1	isotropic	sample_conditions_1
3D H(CCO)NH	sample_1	isotropic	sample_conditions_1
3D HBHA(CO)NH	sample_1	isotropic	sample_conditions_1
2D 1H-13C HSQC	sample_2	isotropic	sample_conditions_1
3D 1H-13C NOESY	sample_2	isotropic	sample_conditions_1

PDB	2RU1
GB	AEE28633
REF	NP_001077509
SP	A8MQA5
AlphaFold	A8MQA5

BMRB Entry 11540

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links:

1	GLY	PRO	GLU	LYS	MET	GLU	VAL	LYS	GLU	ILE
2	GLY	ARG	SER	SER	LYS	ILE	ILE	LEU	PRO	ALA
3	CYS	MET	HIS	GLU	THR	CYS	SER	GLY	GLY	PHE
4	SER	LEU	LYS	ASN	ASP	CYS	TRP	CYS	CYS	LEU
5	ARG	LEU	LYS	THR	LYS	GLN	ALA	ARG	CYS	TRP
6	LYS	GLU	LYS	GLU	PHE	PRO	ASN	ALA	LYS	GLU
7	LEU	CYS	PHE	ALA	ASN	CYS	PRO	PRO	LEU	GLU

1	GLY	PRO	GLU	LYS	MET	GLU	VAL	LYS	GLU	ILE
2	GLY	ARG	SER	SER	LYS	ILE	ILE	LEU	PRO	ALA
3	CYS	MET	HIS	GLU	THR	CYS	SER	GLY	GLY	PHE
4	SER	LEU	LYS	ASN	ASP	CYS	TRP	CYS	CYS	LEU
5	ARG	LEU	LYS	THR	LYS	GLN	ALA	ARG	CYS	TRP
6	LYS	GLU	LYS	GLU	PHE	PRO	ASN	ALA	LYS	GLU
7	LEU	CYS	PHE	ALA	ASN	CYS	PRO	PRO	LEU	GLU

1	GLY	PRO	GLU	LYS	MET	GLU	VAL	LYS	GLU	ILE
2	GLY	ARG	SER	SER	LYS	ILE	ILE	LEU	PRO	ALA
3	CYS	MET	HIS	GLU	THR	CYS	SER	GLY	GLY	PHE
4	SER	LEU	LYS	ASN	ASP	CYS	TRP	CYS	CYS	LEU
5	ARG	LEU	LYS	THR	LYS	GLN	ALA	ARG	CYS	TRP
6	LYS	GLU	LYS	GLU	PHE	PRO	ASN	ALA	LYS	GLU
7	LEU	CYS	PHE	ALA	ASN	CYS	PRO	PRO	LEU	GLU