BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 15291

Title: Backbone 1H Chemical Shift Assignments for N-Me-Gly13   PubMed: 19164290

Deposition date: 2007-06-06 Original release date: 2009-02-09

Authors: Sabo, Jennifer; Harris, Karen; Coley, Andrew; Karas, John; Casey, Joanne; Tan, Yen Yee; Norton, Raymond; Hughes, Andrew; Scanlon, Denis; Foley, Michael

Citation: Harris, Karen; Casey, Joanne; Coley, Andrew; Karas, John; Sabo, Jennifer; Tan, Yen Yee; Dolezal, Olan; Norton, Raymond; Hughes, Andrew; Scanlon, Denis; Foley, Michael. "Rapid optimization of a peptide inhibitor of malaria parasite invasion by comprehensive N-methyl scanning."  J. Biol. Chem. 284, 9361-9371 (2009).

Assembly members:
N-Me-Gly13, polymer, 20 residues, Formula weight is not available

Natural source:   Common Name: not available   Taxonomy ID: not available   Superkingdom: not available   Kingdom: not available   Genus/species: not available not available

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):
N-Me-Gly13: VFAEFLPLFSKFXSRMHILK

Data sets:
Data typeCount
1H chemical shifts131

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1N-Me-Gly131

Entities:

Entity 1, N-Me-Gly13 20 residues - Formula weight is not available

Methylation of backbone amide for Gly13

1   VALPHEALAGLUPHELEUPROLEUPHESER
2   LYSPHESARSERARGMETHISILELEULYS

Samples:

sample_1: N-Me-Gly13 1.7 mM; H2O 95%; D2O 5%

sample_conditions_1: pH: 4.6; pressure: 1 atm; temperature: 278 K

Experiments:

NameSampleSample stateSample conditions
2D 1H-1H TOCSYsample_1isotropicsample_conditions_1
2D 1H-1H NOESYsample_1isotropicsample_conditions_1
2D DQF-COSYsample_1isotropicsample_conditions_1

Software:

TOPSPIN v1.3, Bruker Biospin - collection, processing

NMR spectrometers:

  • Bruker DRX 600 MHz