BMRB Entry 15376

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR15376

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Title:
SOLUTION STRUCTURE OF A DNA DUPLEX CONTAINING THE UNIVERSAL BASE 5-NITROINDOLE-3-CARBOXAMIDE
Deposition date:
2007-07-12
Original release date:
2007-09-04
Authors:
Gallego, Jose; Loakes, David
Citation:

Citation: Gallego, Jose; Loakes, David. "Solution structure and dynamics of DNA duplexes containing the universal base analogues 5-nitroindole and 5-nitroindole-3-carboxamide"  NUCLEIC ACIDS RES. 35, 2904-2912 (2007).
PubMed: 17438041

Assembly members:

Assembly members:
5'-D(*GP*TP*AP*CP*(NCX)P*AP*CP*GP*CP*GP*TP*TP*GP*TP*AP*C)-3'_(1)_, polymer, 16 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: not available   Taxonomy ID: not available   Superkingdom: not available   Kingdom: not available   Genus/species: not available not available

Experimental source:

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
5'-D(*GP*TP*AP*CP*(NCX)P*AP*CP*GP*CP*GP*TP*TP*GP*TP*AP*C)-3'_(1)_: GTACXACGCGTTGTAC

Data sets:
Data typeCount
1H chemical shifts170
31P chemical shifts15

Additional metadata:

  • Assembly
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Assembly:

Entity Assembly IDEntity NameEntity ID
1modified DNA monomer1
2modified DNA monomer1

Entities:

Entity 1, modified DNA monomer 16 residues - Formula weight is not available

THE STRUCTURE OF ONE SYMMETRICAL HALF OF THE SELF-COMPLEMENTARY (5'-D(*GP*TP*AP*CP*(NCX)P*AP*CP*GP*CP*GP*TP*TP*GP*TP*AP*C)-3')2 DUPLEX IS PROVIDED

1   DGDTDADCNCXDADCDGDCDG
2   DTDTDGDTDADC