BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 15749

Title: D,L-Peptide Foldamers: A Curved Structure in PBS   PubMed: 19784965

Deposition date: 2008-05-02 Original release date: 2009-09-29

Authors: Clark, Thomas; Kulp, John

Citation: Kulp, John; Clark, Thomas. "Engineering a beta-Helical d,l-Peptide for Folding in Polar Media"  Chemistry 15, 11867-11877 (2009).

Assembly members:
PBS, polymer, 22 residues, 2238.646 Da.

Natural source:   Common Name: not available   Taxonomy ID: not available   Superkingdom: not available   Kingdom: not available   Genus/species: not available not available

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):
PBS: LEVRLTATVPGAELKVTLTA PG

Data sets:
Data typeCount
1H chemical shifts168
coupling constants20

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1PBS1

Entities:

Entity 1, PBS 22 residues - 2238.646 Da.

1   LEUGLUVALARGLEUTHRALATHRVALPRO
2   GLYALAGLULEULYSVALTHRLEUTHRALA
3   PROGLY

Samples:

sample_1: entity 2.5 mM; PBS Buffer 1 mM; D2O 10 v/v %; H2O 90 v/v %

sample_conditions_1: pH: 7.0; pressure: 1 atm; temperature: 278 K

Experiments:

NameSampleSample stateSample conditions
2D 1H-1H NOESYsample_1isotropicsample_conditions_1
2D 1H-1H TOCSYsample_1isotropicsample_conditions_1
2D DQF-COSYsample_1isotropicsample_conditions_1
2D ECOSYsample_1isotropicsample_conditions_1

Software:

X-PLOR NIH, Schwieters, Kuszewski, Tjandra and Clore - refinement, structure solution

NMRPipe, Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax - processing

VNMR, Varian - collection

SPARKY, Goddard - data analysis, peak picking

NMR spectrometers:

  • Bruker AMX 500 MHz

Related Database Links:

BMRB 15748