BMRB Entry 15970

Name: SOLUTION STRUCTURE OF THE LSM DOMAIN OF DROSOPHILA MELANOGASTER TRAL (TRAILER HITCH)
Published: 2009-03-18

Chem Shift validation: AVS_anomalous, AVS_full, LACS, SPARTA
BMRB Entry DOI: doi:10.13018/BMR15970

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

SOLUTION STRUCTURE OF THE LSM DOMAIN OF DROSOPHILA MELANOGASTER TRAL (TRAILER HITCH)

Deposition date:

2008-10-02

Original release date:

2009-03-18

Authors:

Tritschler, F.; Coles, M.; Truffault, V.

Citation:

Citation: Tritschler, F.; Eulalio, A.; Helms, S.; Weichenrieder, O.; Schmidt, S.; Izaurralde, E.; Truffault, V.. "Similar Modes of Interaction Enable Trailer Hitch and Edc3 to Associate with Dcp1 and Me31B in Distinct Protein Complexes" Mol. Cell. Biol 28, 6695-6708 (2008).
PubMed: 18765641

Assembly members:

Assembly members:
TRAL-TRAILER_HITCH, polymer, 88 residues, Formula weight is not available

Natural source:

Natural source: Common Name: FRUIT FLY Taxonomy ID: 7227 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: DROSOPHILA MELANOGASTER

Experimental source:

Experimental source: Production method: recombinant technology Host organism: ESCHERICHIA COLI Vector: PETM60

Entity Sequences (FASTA):

Entity Sequences (FASTA):
TRAL-TRAILER_HITCH: GAMAMSGGLPELGSKISLIS KADIRYEGRLYTVDPQECTI ALSSVRSFGTEDRDTQFQIA PQSQIYDYILFRGSDIKDIR VVNNHTLP

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	327
15N chemical shifts	71
1H chemical shifts	540

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	TRAL-TRAILER HITCH	1

Entities:

Entity 1, TRAL-TRAILER HITCH 88 residues - Formula weight is not available

1

GLY

ALA

MET

ALA

MET

SER

GLY

LEU

PRO

2

GLU

LEU

GLY

SER

LYS

ILE

SER

LEU

ILE

SER

3

LYS

ALA

ASP

ILE

ARG

TYR

GLU

GLY

ARG

LEU

4

TYR

THR

VAL

ASP

PRO

GLN

GLU

CYS

THR

ILE

5

ALA

LEU

SER

VAL

ARG

SER

PHE

GLY

THR

6

GLU

ASP

ARG

ASP

THR

GLN

PHE

GLN

ILE

ALA

7

PRO

GLN

SER

GLN

ILE

TYR

ASP

TYR

ILE

LEU

8

PHE

ARG

GLY

SER

ASP

ILE

LYS

ASP

ILE

ARG

9

VAL

ASN

HIS

THR

LEU

PRO

Name	Sample	Sample state	Sample conditions
HNCACO	sample_1	isotropic	sample_conditions_1
HNCO	sample_1	isotropic	sample_conditions_1
HNCACB	sample_1	isotropic	sample_conditions_1
CBCACONH	sample_1	isotropic	sample_conditions_1
HNHA	sample_1	isotropic	sample_conditions_1
HNHB	sample_1	isotropic	sample_conditions_1
CCH- COSY	sample_1	isotropic	sample_conditions_1
CCH-TOCSY	sample_1	isotropic	sample_conditions_1
HNH-NOESY	sample_1	isotropic	sample_conditions_1
NNH-NOESY	sample_1	isotropic	sample_conditions_1
CNH-NOESY	sample_1	isotropic	sample_conditions_1
HCH- NOESY	sample_1	isotropic	sample_conditions_1

PDB	2VXE
GB	AAF49905 AAL39211 AGB94462 AGB94463 AGB94464
REF	NP_001261769 NP_001261770 NP_001261771 NP_001261772 NP_001261773

BMRB Entry 15970

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links: