BMRB Entry 16234
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR16234
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Title: Relaxation data of the N-terminal domain of capsid protein from the Mason-Pfizer monkey virus PubMed: 19527730
Deposition date: 2009-03-31 Original release date: 2009-06-17
Authors: Macek, Pavel; Kaderavek, Pavel; Zidek, Lukas; Sklenar, Vladimir; Macek, Pavel
Citation: Macek, Pavel; Chmelik, Josef; Krizova, Ivana; Kaderavek, Pavel; Padrta, Petr; Zidek, Lukas; Wildova, Marcela; Hadravova, Romana; Chaloupkova, Radka; Pichova, Iva; Ruml, Tomas; Rumlova, Michaela; Sklenar, Vladimir. "NMR structure of the N-terminal domain of capsid protein from the Mason-Pfizer monkey virus" J. Mol. Biol. 392, 100-114 (2009).
Assembly members:
MPMV_NTD_CA, polymer, 140 residues, Formula weight is not available
Natural source: Common Name: Mason-Pfizer Monkey Virus Taxonomy ID: 11855 Superkingdom: Viruses Kingdom: not available Genus/species: Betaretrovirus Mason-Pfizer monkey virus
Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET22b
Entity Sequences (FASTA):
MPMV_NTD_CA: PVTETVDGQGQAWRHHNGFD
FAVIKELKTAASQYGATAPY
TLAIVESVADNWLTPTDWNT
LVRAVLSGGDHLLWKSEFFE
NCRDTAKRNQQAGNGWDFDM
LTGSGNYSSTDAQMQYDPGL
FAQIQAAATKAWRKLPVKGD
- heteronucl_NOEs
- heteronucl_T1_relaxation
- heteronucl_T2_relaxation
Data type | Count |
heteronuclear NOE values | 111 |
T1 relaxation values | 111 |
T2 relaxation values | 111 |
Additional metadata:
Assembly:
Entity Assembly ID | Entity Name | Entity ID |
---|---|---|
1 | MPMV NTD CA | 1 |
Entities:
Entity 1, MPMV NTD CA 140 residues - Formula weight is not available
1 | PRO | VAL | THR | GLU | THR | VAL | ASP | GLY | GLN | GLY | |
2 | GLN | ALA | TRP | ARG | HIS | HIS | ASN | GLY | PHE | ASP | |
3 | PHE | ALA | VAL | ILE | LYS | GLU | LEU | LYS | THR | ALA | |
4 | ALA | SER | GLN | TYR | GLY | ALA | THR | ALA | PRO | TYR | |
5 | THR | LEU | ALA | ILE | VAL | GLU | SER | VAL | ALA | ASP | |
6 | ASN | TRP | LEU | THR | PRO | THR | ASP | TRP | ASN | THR | |
7 | LEU | VAL | ARG | ALA | VAL | LEU | SER | GLY | GLY | ASP | |
8 | HIS | LEU | LEU | TRP | LYS | SER | GLU | PHE | PHE | GLU | |
9 | ASN | CYS | ARG | ASP | THR | ALA | LYS | ARG | ASN | GLN | |
10 | GLN | ALA | GLY | ASN | GLY | TRP | ASP | PHE | ASP | MET | |
11 | LEU | THR | GLY | SER | GLY | ASN | TYR | SER | SER | THR | |
12 | ASP | ALA | GLN | MET | GLN | TYR | ASP | PRO | GLY | LEU | |
13 | PHE | ALA | GLN | ILE | GLN | ALA | ALA | ALA | THR | LYS | |
14 | ALA | TRP | ARG | LYS | LEU | PRO | VAL | LYS | GLY | ASP |
Samples:
sample_1: MPMV NTD CA, [U-100% 15N], 0.7 1.0 mM; sodium chloride 150 mM
sample_conditions_1: ionic strength: 0.15 M; pH: 8.0; pressure: 1 atm; temperature: 298 K
Experiments:
Name | Sample | Sample state | Sample conditions |
---|---|---|---|
2D 1H-15N HSQC | sample_1 | isotropic | sample_conditions_1 |
Software:
Relax, d'Auvergne, Gooley - relaxation analysis
NMR spectrometers:
- Bruker Avance 600 MHz