BMRB Entry 18176

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR18176

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Title:
Backbone chemical shift assignments for the oxidized form of cVIMP-Cys
Deposition date:
2012-01-04
Original release date:
2012-06-18
Authors:
Christensen, Lea Cecilie; Teilum, Kaare; Ellgaard, Lars
Citation:

Citation: Christensen, Lea Cecilie; Jensen, Njal Winther; Vala, Andrea; Kamarauskaite, Jurate; Johansson, Linda; Winther, Jakob Rahr; Hofmann, Kay; Teilum, Kaare; Ellgaard, Lars. "The human selenoprotein VCP-interacting membrane protein (VIMP) is non-globular and harbors a reductase function in an intrinsically disordered region."  J. Biol. Chem. 287, 26388-26399 (2012).
PubMed: 22700979

Assembly members:

Assembly members:
cVIMP-Cys_ox, polymer, 142 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: pLE358

Entity Sequences (FASTA):

Entity Sequences (FASTA):
cVIMP-Cys_ox: MQKLSARLRALRQRQLDRAA AAVEPDVVVKRQEALAAARL KMQEELNAQVEKHKEKLKQL EEEKRRQKIEMWDSMQEGKS YKGNAKKPQEEDSPGPSTSS VLKRKSDRKPLRGGGYNPLS GEGGGACSWRPGRRGPSSGG CG

Data sets:
Data typeCount
13C chemical shifts169
15N chemical shifts81
1H chemical shifts81

Additional metadata:

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Assembly:

Entity Assembly IDEntity NameEntity ID
1cVIMP-Cys1

Entities:

Entity 1, cVIMP-Cys 142 residues - Formula weight is not available

Residues 2-142 in the sequence represent residues 49-189 in human VIMP (SelS)

1   METGLNLYSLEUSERALAARGLEUARGALA
2   LEUARGGLNARGGLNLEUASPARGALAALA
3   ALAALAVALGLUPROASPVALVALVALLYS
4   ARGGLNGLUALALEUALAALAALAARGLEU
5   LYSMETGLNGLUGLULEUASNALAGLNVAL
6   GLULYSHISLYSGLULYSLEULYSGLNLEU
7   GLUGLUGLULYSARGARGGLNLYSILEGLU
8   METTRPASPSERMETGLNGLUGLYLYSSER
9   TYRLYSGLYASNALALYSLYSPROGLNGLU
10   GLUASPSERPROGLYPROSERTHRSERSER
11   VALLEULYSARGLYSSERASPARGLYSPRO
12   LEUARGGLYGLYGLYTYRASNPROLEUSER
13   GLYGLUGLYGLYGLYALACYSSERTRPARG
14   PROGLYARGARGGLYPROSERSERGLYGLY
15   CYSGLY

Related Database Links:

BMRB 18177
GB AAF67483 AAH05840 AAI07775 AAK15708 AAP85541
REF NP_001108228 NP_001186934 NP_060915 NP_982298 XP_003281631
SP Q9BQE4
AlphaFold Q9BQE4

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks