BMRB Entry 20031
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR20031
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Title: 13C, 1H chemical shifts and structure of Apelin 17 (Human form, minor conformation at 5C) PubMed: 19123778
Deposition date: 2008-07-03 Original release date: 2009-02-04
Authors: Langelaan, David; Bebbington, E.; Reddy, Tyler; Rainey, Jan
Citation: Langelaan, David; Bebbington, E.; Reddy, Tyler; Rainey, Jan. "Structural insight into G-protein coupled receptor binding by apelin" Biochemistry 48, 537-548 (2009).
Assembly members:
Apelin_17, polymer, 17 residues, 2145.619 Da.
Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens
Experimental source: Production method: recombinant technology
Entity Sequences (FASTA):
Apelin_17: KFRRQRPRLSHKGPMPF
- assigned_chemical_shifts
- coupling_constants
| Data type | Count |
| 1H chemical shifts | 145 |
| 13C chemical shifts | 60 |
| coupling constants | 12 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | Apelin 17 | 1 |
Entities:
Entity 1, Apelin 17 17 residues - 2145.619 Da.
| 1 | LYS | PHE | ARG | ARG | GLN | ARG | PRO | ARG | LEU | SER | ||||
| 2 | HIS | LYS | GLY | PRO | MET | PRO | PHE |
Samples:
Apelin_17_sample: Apelin 17 4 ± 0.4 mM; DSS 1 mM; sodium azide 1 mM; Sodium Acetate, [U-99% 2H], 20 mM
5C: pH: 5; temperature: 278 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 2D 1H-13C HSQC | Apelin_17_sample | isotropic | 5C |
| 2D 1H-1H TOCSY | Apelin_17_sample | isotropic | 5C |
| 2D 1H-1H NOESY | Apelin_17_sample | isotropic | 5C |
| 2D DQF-COSY | Apelin_17_sample | isotropic | 5C |
Software:
VNMR, Varian - collection
NMRPipe, Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax - processing
NMRDraw, Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax - processing
SPARKY, Goddard - chemical shift assignment, peak picking
TOPSPIN, Bruker Biospin - collection
X-PLOR NIH, Schwieters, Kuszewski, Tjandra and Clore - structure solution
NMR spectrometers:
- Varian INOVA 800 MHz
- Bruker Avance 500 MHz
Related Database Links:
| BMRB | 16275 20029 20030 20082 |
| DBJ | BAA84974 BAA84975 BAA84976 BAA84977 BAC31156 |
| EMBL | CAC83678 |
| GB | AAF25814 AAF25815 AAH20015 AAH21104 AAH80843 |
| REF | NP_001177797 NP_038940 NP_059109 NP_113800 NP_776928 |
| SP | Q9R0R3 Q9R0R4 Q9TUI9 Q9ULZ1 |
| TPG | DAA13389 |
| AlphaFold | Q9TUI9 Q9ULZ1 Q9R0R4 Q9R0R3 |