BMRB Entry 25364

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR25364

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Title:
Backbone 1H, 13C, and 15N Chemical Shift Assignments drosophila stem-loop binding protein complexed with histone mRNA stem-loop
Deposition date:
2014-11-24
Original release date:
2014-12-09
Authors:
Zhang, Jun; Tan, Dazhi; DeRose, Eugene; Perera, Lalith; Dominski, Zbigniew; Marzluff, William; Tong, Liang; Hall, Traci
Citation:

Citation: Zhang, Jun; Derose, Eugene; Perera, Lalith; Dominski, Zbigniew; Marzluff, William; Tong, Liang; Hall, Traci. "Molecular mechanisms for the regulation of histone mRNA stem-loop binding protein by phosphorylation"  Proc. Natl. Acad. Sci. U.S.A. 111, E2937-E2946 (2014).
PubMed: 25002523

Assembly members:

Assembly members:
SLBP, polymer, 93 residues, Formula weight is not available
RNA, polymer, 28 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: fruit fly   Taxonomy ID: 7227   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Drosophila melanogaster

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: PSMT3

Entity Sequences (FASTA):

Entity Sequences (FASTA):
SLBP: SSSYTEADPAILSRRQKQID YGKNTAAYERYVEMVPKDER TRDHPREPNKYGKYSRRAFD GLVKIWRKSLHIYDPPTQAR DTAKDENEDEDED
RNA: GGCCAAAGGCCCUUUUCAGG GCCACCCA

Data sets:
Data typeCount
13C chemical shifts148
1H chemical shifts62
15N chemical shifts62

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1SLBP1
2RNA2

Entities:

Entity 1, SLBP 93 residues - Formula weight is not available

1   SERSERSERTYRTHRGLUALAASPPROALA
2   ILELEUSERARGARGGLNLYSGLNILEASP
3   TYRGLYLYSASNTHRALAALATYRGLUARG
4   TYRVALGLUMETVALPROLYSASPGLUARG
5   THRARGASPHISPROARGGLUPROASNLYS
6   TYRGLYLYSTYRSERARGARGALAPHEASP
7   GLYLEUVALLYSILETRPARGLYSSERLEU
8   HISILETYRASPPROPROTHRGLNALAARG
9   ASPTHRALALYSASPGLUASNGLUASPGLU
10   ASPGLUASP

Entity 2, RNA 28 residues - Formula weight is not available

1   GGCCAAAGGC
2   CCUUUUCAGG
3   GCCACCCA

Related Database Links:

BMRB 25365
PDB 4TUW 4TUX
GB AAF56867 AAF71752 AAG16723 AAL90413 AAM50696
REF NP_477480
SP Q9VAN6
AlphaFold Q9VAN6

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks