BMRB Entry 26300

Title:
The structure of SeviL, a GM1b/asialo-GM1 binding R-type lectin from the mussel Mytilisepta virgata
Deposition date:
2020-10-01
Original release date:
2020-12-22
Authors:
Kamata, Kenichi; Mizutani, Kenji; Takahashi, Katsuya; Marchetti, Roberta; Silipo, Alba; Addy, Christine; Park, Sam-Yong; Fujii, Yuki; Fujita, Hideaki; Konuma, Tsuyoshi; Ikegami, Takahisa; Ozeki, Yasuhiro; Tame, Jeremy
Citation:

Citation: Kamata, Kenichi; Mizutani, Kenji; Takahashi, Katsuya; Marchetti, Roberta; Silipo, Alba; Addy, Christine; Park, Sam-Yong; Fujii, Yuki; Fujita, Hideaki; Konuma, Tsuyoshi; Ikegami, Takahisa; Ozeki, Yasuhiro; Tame, Jeremy. "The structure of SeviL, a GM1b/asialo-GM1 binding R-type lectin from the mussel Mytilisepta virgata"  Sci. Rep. 10, 22102-22102 (2020).
PubMed: 33328520

Assembly members:

Assembly members:
entity_1, polymer, 132 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: not available   Taxonomy ID: 2547956   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Mytilisepta virgata

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: pET28

Data sets:
Data typeCount
13C chemical shifts351
15N chemical shifts114
1H chemical shifts114

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1subunit 11

Entities:

Entity 1, subunit 1 132 residues - Formula weight is not available

The three N-terminal residues, GSH, represent the remaining non-native residues after cleaving the His-tag. The sequence number 1 starts with Met.

1   GLYSERHISMETSERSERVALTHRILEGLY
2   LYSCYSTYRILEGLNASNARGGLUASNGLY
3   GLYARGALAPHETYRASNLEUGLYARGLYS
4   ASPLEUGLYILEPHETHRGLYLYSMETTYR
5   ASPASPGLNILETRPSERPHEGLNLYSSER
6   ASPTHRPROGLYTYRTYRTHRILEGLYARG
7   GLUSERLYSPHELEUGLNTYRASNGLYGLU
8   GLNVALILEMETSERASPILEGLUGLNASP
9   THRTHRLEUTRPSERLEUGLUGLUVALPRO
10   GLUASPLYSGLYPHETYRARGLEULEUASN
11   LYSVALHISLYSALATYRLEUASPTYRASN
12   GLYGLYASPLEUVALALAASNLYSHISGLN
13   THRGLUSERGLULYSTRPILELEUPHELYS
14   ALATYR

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks