BMRB Entry 26841
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR26841
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Title: Chemical shift assignment of CBP-ID3 PubMed: 28680062
Deposition date: 2016-06-29 Original release date: 2017-07-10
Authors: Piai, Alessandro; Contreras-Martos, Sara; Kosol, Simone; Varadi, Mihaly; Bekesi, Angela; Lebrun, Pierre; Volkov, Alex; Pierattelli, Roberta; Felli, Isabella; Tompa, Peter
Citation: Contreras-Martos, Sara; Piai, Alessandro; Kosol, Simone; Varadi, Mihaly; Bekesi, Angela; Lebrun, Pierre; Volkov, Alexander; Gevaert, Kris; Pierattelli, Roberta; Felli, Isabella; Tompa, Peter. "Linking functions: an additional role for an intrinsically disordered linker domain in the transcriptional coactivator CBP" Sci. Rep. 7, 4676-4676 (2017).
Assembly members:
ID3, polymer, 406 residues, Formula weight is not available
Natural source: Common Name: humans Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens
Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pet16b
- assigned_chemical_shifts
Data type | Count |
13C chemical shifts | 1092 |
15N chemical shifts | 365 |
1H chemical shifts | 1378 |
Additional metadata:
Assembly:
Entity Assembly ID | Entity Name | Entity ID |
---|---|---|
1 | ID3 | 1 |
Entities:
Entity 1, ID3 406 residues - Formula weight is not available
1 | HIS | LYS | GLN | GLY | ILE | LEU | GLY | ASN | GLN | PRO | ||||
2 | ALA | LEU | PRO | ALA | PRO | GLY | ALA | GLN | PRO | PRO | ||||
3 | VAL | ILE | PRO | GLN | ALA | GLN | PRO | VAL | ARG | PRO | ||||
4 | PRO | ASN | GLY | PRO | LEU | SER | LEU | PRO | VAL | ASN | ||||
5 | ARG | MET | GLN | VAL | SER | GLN | GLY | MET | ASN | SER | ||||
6 | PHE | ASN | PRO | MET | SER | LEU | GLY | ASN | VAL | GLN | ||||
7 | LEU | PRO | GLN | ALA | PRO | MET | GLY | PRO | ARG | ALA | ||||
8 | ALA | SER | PRO | MET | ASN | HIS | SER | VAL | GLN | MET | ||||
9 | ASN | SER | MET | GLY | SER | VAL | PRO | GLY | MET | ALA | ||||
10 | ILE | SER | PRO | SER | ARG | MET | PRO | GLN | PRO | PRO | ||||
11 | ASN | MET | MET | GLY | ALA | HIS | THR | ASN | ASN | MET | ||||
12 | MET | ALA | GLN | ALA | PRO | ALA | GLN | SER | GLN | PHE | ||||
13 | LEU | PRO | GLN | ASN | GLN | PHE | PRO | SER | SER | SER | ||||
14 | GLY | ALA | MET | SER | VAL | GLY | MET | GLY | GLN | PRO | ||||
15 | PRO | ALA | GLN | THR | GLY | VAL | SER | GLN | GLY | GLN | ||||
16 | VAL | PRO | GLY | ALA | ALA | LEU | PRO | ASN | PRO | LEU | ||||
17 | ASN | MET | LEU | GLY | PRO | GLN | ALA | SER | GLN | LEU | ||||
18 | PRO | CYS | PRO | PRO | VAL | THR | GLN | SER | PRO | LEU | ||||
19 | HIS | PRO | THR | PRO | PRO | PRO | ALA | SER | THR | ALA | ||||
20 | ALA | GLY | MET | PRO | SER | LEU | GLN | HIS | THR | THR | ||||
21 | PRO | PRO | GLY | MET | THR | PRO | PRO | GLN | PRO | ALA | ||||
22 | ALA | PRO | THR | GLN | PRO | SER | THR | PRO | VAL | SER | ||||
23 | SER | SER | GLY | GLN | THR | PRO | THR | PRO | THR | PRO | ||||
24 | GLY | SER | VAL | PRO | SER | ALA | THR | GLN | THR | GLN | ||||
25 | SER | THR | PRO | THR | VAL | GLN | ALA | ALA | ALA | GLN | ||||
26 | ALA | GLN | VAL | THR | PRO | GLN | PRO | GLN | THR | PRO | ||||
27 | VAL | GLN | PRO | PRO | SER | VAL | ALA | THR | PRO | GLN | ||||
28 | SER | SER | GLN | GLN | GLN | PRO | THR | PRO | VAL | HIS | ||||
29 | ALA | GLN | PRO | PRO | GLY | THR | PRO | LEU | SER | GLN | ||||
30 | ALA | ALA | ALA | SER | ILE | ASP | ASN | ARG | VAL | PRO | ||||
31 | THR | PRO | SER | SER | VAL | ALA | SER | ALA | GLU | THR | ||||
32 | ASN | SER | GLN | GLN | PRO | GLY | PRO | ASP | VAL | PRO | ||||
33 | VAL | LEU | GLU | MET | LYS | THR | GLU | THR | GLN | ALA | ||||
34 | GLU | ASP | THR | GLU | PRO | ASP | PRO | GLY | GLU | SER | ||||
35 | LYS | GLY | GLU | PRO | ARG | SER | GLU | MET | MET | GLU | ||||
36 | GLU | ASP | LEU | GLN | GLY | ALA | SER | GLN | VAL | LYS | ||||
37 | GLU | GLU | THR | ASP | ILE | ALA | GLU | GLN | LYS | SER | ||||
38 | GLU | PRO | MET | GLU | VAL | ASP | GLU | LYS | LYS | PRO | ||||
39 | GLU | VAL | LYS | VAL | GLU | VAL | LYS | GLU | GLU | GLU | ||||
40 | GLU | SER | SER | SER | ASN | GLY | THR | ALA | SER | GLN | ||||
41 | SER | THR | SER | PRO | SER | GLN |
Samples:
sample_1: ID3, [U-100% 13C; U-100% 15N], 0.4 mM; KH2PO4 50 mM; sodium chloride 150 mM; TCEP 2.5 mM; H2O 90%; D2O 10%
sample_conditions_1: pH: 6.5; pressure: 1 atm; temperature: 297.2 K
Experiments:
Name | Sample | Sample state | Sample conditions |
---|---|---|---|
2D 1H-15N HSQC | sample_1 | isotropic | sample_conditions_1 |
3D H(CACON) | sample_1 | isotropic | sample_conditions_1 |
4D HCBCACON | sample_1 | isotropic | sample_conditions_1 |
4D HCBCANCO | sample_1 | isotropic | sample_conditions_1 |
4D (HCA)CON(CA)CON | sample_1 | isotropic | sample_conditions_1 |
4D (HN)CON(CA)CON | sample_1 | isotropic | sample_conditions_1 |
5D HNCANCO | sample_1 | isotropic | sample_conditions_1 |
5D HNCACON | sample_1 | isotropic | sample_conditions_1 |
2D BEST-TROSY | sample_1 | isotropic | sample_conditions_1 |
3D BT-HNCO | sample_1 | isotropic | sample_conditions_1 |
3D (H)N(CA)NNH | sample_1 | isotropic | sample_conditions_1 |
4D TROSY-(H)NCO(CA)NNH | sample_1 | isotropic | sample_conditions_1 |
4D TROSY-HN(COCA)NNH | sample_1 | isotropic | sample_conditions_1 |
Software:
TOPSPIN, Bruker Biospin - collection
NMRPipe, Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax - processing
SPARKY, Goddard - chemical shift assignment
NMR spectrometers:
- Bruker Avance 700 MHz
- Bruker Avance III 950 MHz
Download HSQC peak lists in one of the following formats:
CSV: Backbone
or all simulated shifts
SPARKY: Backbone
or all simulated shifts