BMRB Entry 27031
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR27031
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Title: Chemical shift assignment of DANCER-1, a natively folded and dynamic hexamutant of the B1 domain of streptococcal protein G (GB1) PubMed: 29058725
Deposition date: 2017-02-10 Original release date: 2017-10-10
Authors: Damry, Adam; Davey, James; Goto, Natalie; Chica, Roberto
Citation: Davey, James; Damry, Adam; Goto, Natalie; Chica, Roberto. "Rational design of proteins that exchange on functional timescales." Nat. Chem. Biol. 13, 1280-1285 (2017).
Assembly members:
DANCER-1, polymer, 64 residues, Formula weight is not available
Natural source: Common Name: Streptococcus sp. GX7805 Taxonomy ID: 1325 Superkingdom: Bacteria Kingdom: not available Genus/species: Streptococcus Streptococcus sp. GX7805
Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pJ414
Entity Sequences (FASTA):
DANCER-1: MHHHHHHGMTFKAIINGKTL
KGETTTEAVDAATAEKVFKQ
YFNDNGLDGEWTYDDATKTF
TITE
- assigned_chemical_shifts
Data type | Count |
13C chemical shifts | 162 |
15N chemical shifts | 56 |
1H chemical shifts | 253 |
Additional metadata:
Assembly:
Entity Assembly ID | Entity Name | Entity ID |
---|---|---|
1 | DANCER-1 | 1 |
Entities:
Entity 1, DANCER-1 64 residues - Formula weight is not available
1 | MET | HIS | HIS | HIS | HIS | HIS | HIS | GLY | MET | THR | ||||
2 | PHE | LYS | ALA | ILE | ILE | ASN | GLY | LYS | THR | LEU | ||||
3 | LYS | GLY | GLU | THR | THR | THR | GLU | ALA | VAL | ASP | ||||
4 | ALA | ALA | THR | ALA | GLU | LYS | VAL | PHE | LYS | GLN | ||||
5 | TYR | PHE | ASN | ASP | ASN | GLY | LEU | ASP | GLY | GLU | ||||
6 | TRP | THR | TYR | ASP | ASP | ALA | THR | LYS | THR | PHE | ||||
7 | THR | ILE | THR | GLU |
Samples:
sample_1: DANCER-1, [U-99% 13C; U-98% 15N], 1 mM; sodium phosphate 10 mM; EDTA 100 uM; sodium azide 0.02 % w/v
sample_conditions_1: ionic strength: 10 mM; pH: 7.4; pressure: 1 atm; temperature: 298 K
Experiments:
Name | Sample | Sample state | Sample conditions |
---|---|---|---|
2D 1H-15N HSQC | sample_1 | isotropic | sample_conditions_1 |
2D 1H-13C HSQC | sample_1 | isotropic | sample_conditions_1 |
3D CBCA(CO)NH | sample_1 | isotropic | sample_conditions_1 |
3D HNCACB | sample_1 | isotropic | sample_conditions_1 |
3D HNCO | sample_1 | isotropic | sample_conditions_1 |
3D 1H-15N TOCSY | sample_1 | isotropic | sample_conditions_1 |
Software:
NMRView, Johnson, One Moon Scientific - chemical shift assignment, peak picking
NMRPipe, Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax - processing
NMR spectrometers:
- Bruker Avance 600 MHz
Download HSQC peak lists in one of the following formats:
CSV: Backbone
or all simulated shifts
SPARKY: Backbone
or all simulated shifts