BMRB Entry 27441

Title:
Long-range effects induced by peptide-MHC binding to a human T cell receptor: Implications for the initiation of T cell signaling
Deposition date:
2018-03-30
Original release date:
2018-08-22
Authors:
He, Yanan; Rangarajan, Sneha; Chen, Yihong; Kerzic, Melissa; Ma, Buyong; Gowthaman, Ragul; Pierce, Brian; Nussinov, Ruth; Mariuzza, Roy; Orban, John
Citation:

Citation: Rangarajan, Sneha; He, Yanan; Chen, Yihong; Kerzic, Melissa; Ma, Buyong; Gowthaman, Ragul; Pierce, Brian; Nussinov, Ruth; Mariuzza, Roy; Orban, John. "Peptide-MHC (pMHC) binding to a human antiviral T cell receptor induces long-range allosteric communication between pMHC- and CD3-binding sites"  J. Biol. Chem. 293, 15991-16005 (2018).
PubMed: 30135211

Assembly members:

Assembly members:
A6TCR_beta, polymer, 245 residues, Formula weight is not available
A6TCR_alpha, polymer, 206 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: pET-26b

Data sets:
Data typeCount
13C chemical shifts536
15N chemical shifts162
1H chemical shifts162

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1A6TCR beta1
2A6TCR alpha2

Entities:

Entity 1, A6TCR beta 245 residues - Formula weight is not available

1   ASNALAGLYVALTHRGLNTHRPROLYSPHE
2   GLNVALLEULYSTHRGLYGLNSERMETTHR
3   LEUGLNCYSALAGLNASPMETASNHISGLU
4   TYRMETSERTRPTYRARGGLNASPPROGLY
5   METGLYLEUARGLEUILEHISTYRSERVAL
6   GLYALAGLYILETHRASPGLNGLYGLUVAL
7   PROASNGLYTYRASNVALSERARGSERTHR
8   THRGLUASPPHEPROLEUARGLEULEUSER
9   ALAALAPROSERGLNTHRSERVALTYRPHE
10   CYSALASERARGPROGLYLEUALAGLYGLY
11   ARGPROGLUGLNTYRPHEGLYPROGLYTHR
12   ARGLEUTHRVALTHRGLUASPLEULYSASN
13   VALPHEPROPROGLUVALALAVALPHEGLU
14   PROSERGLUALAGLUILESERHISTHRGLN
15   LYSALATHRLEUVALCYSLEUALATHRGLY
16   PHETYRPROASPHISVALGLULEUSERTRP
17   TRPVALASNGLYLYSGLUVALHISSERGLY
18   VALCYSTHRASPPROGLNPROLEULYSGLU
19   GLNPROALALEUASNASPSERARGTYRALA
20   LEUSERSERARGLEUARGVALSERALATHR
21   PHETRPGLNASPPROARGASNHISPHEARG
22   CYSGLNVALGLNPHETYRGLYLEUSERGLU
23   ASNASPGLUTRPTHRGLNASPARGALALYS
24   PROVALTHRGLNILEVALSERALAGLUALA
25   TRPGLYARGALAASP

Entity 2, A6TCR alpha 206 residues - Formula weight is not available

1   METGLNLYSGLUVALGLUGLNASNSERGLY
2   PROLEUSERVALPROGLUGLYALAILEALA
3   SERLEUASNCYSTHRTYRSERASPARGGLY
4   SERGLNSERPHEPHETRPTYRARGGLNTYR
5   SERGLYLYSSERPROGLULEUILEMETSER
6   ILETYRSERASNGLYASPLYSGLUASPGLY
7   ARGPHETHRALAGLNLEUASNLYSALASER
8   GLNTYRVALSERLEULEUILEARGASPSER
9   GLNPROSERASPSERALATHRTYRLEUCYS
10   ALAVALTHRTHRASPSERTRPGLYLYSLEU
11   GLNPHEGLYALAGLYTHRGLNVALVALVAL
12   THRPROASPILEGLNASNPROASPPROALA
13   VALTYRGLNLEUARGASPSERLYSSERSER
14   ASPLYSSERVALCYSLEUPHETHRASPPHE
15   ASPSERGLNTHRASNVALSERGLNSERLYS
16   ASPSERASPVALTYRILETHRASPLYSCYS
17   VALLEUASPMETARGSERMETASPPHELYS
18   SERASNSERALAVALALATRPSERASNLYS
19   SERASPPHEALACYSALAASNALAPHEASN
20   ASNSERILEILEPROGLUASPTHRPHEPHE
21   PROSERPROGLUSERSER

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks