BMRB Entry 27583
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR27583
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Title: The structure of the Pro-domain of mouse proNGF in contact with the NGF domain PubMed: 30393051
Deposition date: 2018-08-21 Original release date: 2018-09-21
Authors: Yan, Robert; Yalinca, Havva; Paoletti, Francesca; Gobbo, Francesco; Marchetti, Laura; Kuzmanic, Antonija; Lamba, Doriano; Gervasio, Francesco; Konarev, Petr; Cattaneo, Antonino; Pastore, Annalisa
Citation: Yan, Robert; Yalinca, Havva; Paoletti, Francesca; Gobbo, Francesco; Marchetti, Laura; Kuzmanic, Antonija; Lamba, Doriano; Gervasio, Francesco; Konarev, Petr; Cattaneo, Antonino; Pastore, Annalisa. "The structure of the Pro-domain of mouse proNGF in contact with the NGF domain" Structure 27, 78-89 (2019).
Assembly members:
NGF_pro-domain, polymer, 104 residues, Formula weight is not available
Natural source: Common Name: Mouse Taxonomy ID: 10090 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Mus musculus
Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET-11
Entity Sequences (FASTA):
NGF_pro-domain: MEPYTDSNVPEGDSVPEAHW
TKLQHSLDTALRRARSAPTA
PIAARVTGQTRNITVDPRLF
KKRRLHSPRVLFSTQPPPTS
SDTLDLDFQAHGTIPFNRTH
RSKR
- assigned_chemical_shifts
Data type | Count |
13C chemical shifts | 249 |
15N chemical shifts | 89 |
1H chemical shifts | 91 |
Additional metadata:
Assembly:
Entity Assembly ID | Entity Name | Entity ID |
---|---|---|
1 | NGF Pro-domain | 1 |
Entities:
Entity 1, NGF Pro-domain 104 residues - Formula weight is not available
1 | MET | GLU | PRO | TYR | THR | ASP | SER | ASN | VAL | PRO | ||||
2 | GLU | GLY | ASP | SER | VAL | PRO | GLU | ALA | HIS | TRP | ||||
3 | THR | LYS | LEU | GLN | HIS | SER | LEU | ASP | THR | ALA | ||||
4 | LEU | ARG | ARG | ALA | ARG | SER | ALA | PRO | THR | ALA | ||||
5 | PRO | ILE | ALA | ALA | ARG | VAL | THR | GLY | GLN | THR | ||||
6 | ARG | ASN | ILE | THR | VAL | ASP | PRO | ARG | LEU | PHE | ||||
7 | LYS | LYS | ARG | ARG | LEU | HIS | SER | PRO | ARG | VAL | ||||
8 | LEU | PHE | SER | THR | GLN | PRO | PRO | PRO | THR | SER | ||||
9 | SER | ASP | THR | LEU | ASP | LEU | ASP | PHE | GLN | ALA | ||||
10 | HIS | GLY | THR | ILE | PRO | PHE | ASN | ARG | THR | HIS | ||||
11 | ARG | SER | LYS | ARG |
Samples:
sample_1: NGF pro-domain, [U-99% 13C; U-99% 15N], 0.5 mM; sodium phosphate 50 mM; NaCl 50 mM; EDTA 1 mM
sample_conditions_1: ionic strength: 50 mM; pH: 6.8; pressure: 1 atm; temperature: 273 K
Experiments:
Name | Sample | Sample state | Sample conditions |
---|---|---|---|
2D 1H-15N HSQC | sample_1 | isotropic | sample_conditions_1 |
3D HNCACB | sample_1 | isotropic | sample_conditions_1 |
3D CBCA(CO)NH | sample_1 | isotropic | sample_conditions_1 |
3D HNCO | sample_1 | isotropic | sample_conditions_1 |
3D HN(CA)CO | sample_1 | isotropic | sample_conditions_1 |
Software:
NMR-STAR, CCPN - chemical shift assignment
NMR spectrometers:
- Bruker Avance 600 MHz
Download HSQC peak lists in one of the following formats:
CSV: Backbone
or all simulated shifts
SPARKY: Backbone
or all simulated shifts