BMRB Entry 27877

Name: Inseparable mixture of cytotoxins 2 and 3 Naja kaouthia in major and minor forms
Published: 2021-05-28

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PDB ID: 7o2k
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR27877
MolProbity Validation Chart

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Inseparable mixture of cytotoxins 2 and 3 Naja kaouthia in major and minor forms

Deposition date:

2019-04-15

Original release date:

2021-05-28

Authors:

Dubinnyi, Maxim; Dubovskii, Peter

Citation:

Citation: Dubovskii, Peter; Dubinnyi, Maxim. "Inseparable mixture of cytotoxins 2 and 3 Naja kaouthia in major and minor forms" .

Assembly members:

Assembly members:
CT3nk, polymer, 60 residues, Formula weight is not available
CT2nk, polymer, 60 residues, Formula weight is not available

Natural source:

Natural source: Common Name: monocled cobra Taxonomy ID: 8649 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Naja kaouthia

Experimental source:

Experimental source: Production method: purified from the natural source Host organism: Naja kaouthia

Entity Sequences (FASTA):

Entity Sequences (FASTA):
CT3nk: LKCNKLIPLAYKTCPAGKNL CYKMFMVSNKTVPVKRGCID ACPKNSLLVKYVCCNTDRCN
CT2nk: LKCNKLIPLAYKTCPAGKNL CYKMFMVSNKTVPVKRGCID VCPKNSLLVKYVCCNTDRCN

Data sets:

assigned_chemical_shifts

Data type	Count
13C chemical shifts	441
15N chemical shifts	123
1H chemical shifts	1283

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	Cytotoxin 3 Naja kaouthia in minor form	1
2	Cytotoxin 2 Naja kaouthia in major form	2
3	Cytotoxin 2 Naja kaouthia in minor form	2

Entities:

Entity 1, Cytotoxin 3 Naja kaouthia in minor form 60 residues - Formula weight is not available

1	LEU	LYS	CYS	ASN	LYS	LEU	ILE	PRO	LEU	ALA
2	TYR	LYS	THR	CYS	PRO	ALA	GLY	LYS	ASN	LEU
3	CYS	TYR	LYS	MET	PHE	MET	VAL	SER	ASN	LYS
4	THR	VAL	PRO	VAL	LYS	ARG	GLY	CYS	ILE	ASP
5	ALA	CYS	PRO	LYS	ASN	SER	LEU	LEU	VAL	LYS
6	TYR	VAL	CYS	CYS	ASN	THR	ASP	ARG	CYS	ASN

Entity 2, Cytotoxin 2 Naja kaouthia in major form 60 residues - Formula weight is not available

1	LEU	LYS	CYS	ASN	LYS	LEU	ILE	PRO	LEU	ALA
2	TYR	LYS	THR	CYS	PRO	ALA	GLY	LYS	ASN	LEU
3	CYS	TYR	LYS	MET	PHE	MET	VAL	SER	ASN	LYS
4	THR	VAL	PRO	VAL	LYS	ARG	GLY	CYS	ILE	ASP
5	VAL	CYS	PRO	LYS	ASN	SER	LEU	LEU	VAL	LYS
6	TYR	VAL	CYS	CYS	ASN	THR	ASP	ARG	CYS	ASN

Name	Sample	Sample state	Sample conditions
2D 1H-1H TOCSY	sample_1	isotropic	sample_conditions_1
2D DQF-COSY	sample_1	isotropic	sample_conditions_1
2D 1H-1H NOESY	sample_1	isotropic	sample_conditions_1
2D 1H-13C HSQC	sample_1	isotropic	sample_conditions_1
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
2D 1H-13C HSQC-TOCSY	sample_1	isotropic	sample_conditions_1

BMRB	34392
PDB	6CRF
UNP	P01445
AlphaFold	P01445

BMRB Entry 27877

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links:

1	LEU	LYS	CYS	ASN	LYS	LEU	ILE	PRO	LEU	ALA
2	TYR	LYS	THR	CYS	PRO	ALA	GLY	LYS	ASN	LEU
3	CYS	TYR	LYS	MET	PHE	MET	VAL	SER	ASN	LYS
4	THR	VAL	PRO	VAL	LYS	ARG	GLY	CYS	ILE	ASP
5	ALA	CYS	PRO	LYS	ASN	SER	LEU	LEU	VAL	LYS
6	TYR	VAL	CYS	CYS	ASN	THR	ASP	ARG	CYS	ASN

1	LEU	LYS	CYS	ASN	LYS	LEU	ILE	PRO	LEU	ALA
2	TYR	LYS	THR	CYS	PRO	ALA	GLY	LYS	ASN	LEU
3	CYS	TYR	LYS	MET	PHE	MET	VAL	SER	ASN	LYS
4	THR	VAL	PRO	VAL	LYS	ARG	GLY	CYS	ILE	ASP
5	VAL	CYS	PRO	LYS	ASN	SER	LEU	LEU	VAL	LYS
6	TYR	VAL	CYS	CYS	ASN	THR	ASP	ARG	CYS	ASN

1	LEU	LYS	CYS	ASN	LYS	LEU	ILE	PRO	LEU	ALA
2	TYR	LYS	THR	CYS	PRO	ALA	GLY	LYS	ASN	LEU
3	CYS	TYR	LYS	MET	PHE	MET	VAL	SER	ASN	LYS
4	THR	VAL	PRO	VAL	LYS	ARG	GLY	CYS	ILE	ASP
5	ALA	CYS	PRO	LYS	ASN	SER	LEU	LEU	VAL	LYS
6	TYR	VAL	CYS	CYS	ASN	THR	ASP	ARG	CYS	ASN

1	LEU	LYS	CYS	ASN	LYS	LEU	ILE	PRO	LEU	ALA
2	TYR	LYS	THR	CYS	PRO	ALA	GLY	LYS	ASN	LEU
3	CYS	TYR	LYS	MET	PHE	MET	VAL	SER	ASN	LYS
4	THR	VAL	PRO	VAL	LYS	ARG	GLY	CYS	ILE	ASP
5	VAL	CYS	PRO	LYS	ASN	SER	LEU	LEU	VAL	LYS
6	TYR	VAL	CYS	CYS	ASN	THR	ASP	ARG	CYS	ASN

1	LEU	LYS	CYS	ASN	LYS	LEU	ILE	PRO	LEU	ALA
2	TYR	LYS	THR	CYS	PRO	ALA	GLY	LYS	ASN	LEU
3	CYS	TYR	LYS	MET	PHE	MET	VAL	SER	ASN	LYS
4	THR	VAL	PRO	VAL	LYS	ARG	GLY	CYS	ILE	ASP
5	ALA	CYS	PRO	LYS	ASN	SER	LEU	LEU	VAL	LYS
6	TYR	VAL	CYS	CYS	ASN	THR	ASP	ARG	CYS	ASN

1	LEU	LYS	CYS	ASN	LYS	LEU	ILE	PRO	LEU	ALA
2	TYR	LYS	THR	CYS	PRO	ALA	GLY	LYS	ASN	LEU
3	CYS	TYR	LYS	MET	PHE	MET	VAL	SER	ASN	LYS
4	THR	VAL	PRO	VAL	LYS	ARG	GLY	CYS	ILE	ASP
5	VAL	CYS	PRO	LYS	ASN	SER	LEU	LEU	VAL	LYS
6	TYR	VAL	CYS	CYS	ASN	THR	ASP	ARG	CYS	ASN