BMRB Entry 27895

Name: Backbone 1H, 13C, and 15N Chemical Shift Assignments for dimerization domain of NF-kappaB p50 subunit
Published: 2019-11-25

Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR27895

NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry

Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

Select model:

I am color blind

Download raw data. Direct link to this display. Help

Title:

Backbone 1H, 13C, and 15N Chemical Shift Assignments for dimerization domain of NF-kappaB p50 subunit

Deposition date:

2019-05-09

Original release date:

2019-11-25

Authors:

Mukherjee, Sulakshana; Kumar, Manish; Dadhwal, Prikshat; Atreya, Hanudatta

Citation:

Citation: Kumar, Manish; Dadhwal, Prikshat; Atreya, Hanudatta; Mukherjee, Sulakshana. "Backbone resonance assignments of the dimeric domain of the p50 NF-kappaB subunit" Biomol. NMR Assignments 14, 9-11 (2019).
PubMed: 31446566

Assembly members:

Assembly members:
p50-DD, polymer, 107 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Mouse Taxonomy ID: 10090 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Mus musculus

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET

Entity Sequences (FASTA):

Entity Sequences (FASTA):
p50-DD: MASNLKIVRMDRTAGCVTGG EEIYLLCDKVQKDDIQIRFY EEEENGGVWEGFGDFSPTDV HRQFAIVFKTPKYKDVNITK PASVFVQLRRKSDLETSEPK PFLYYPE

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	297
15N chemical shifts	98
1H chemical shifts	201

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
Hide all

Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	p50 dimerization domain	1

Entities:

Entity 1, p50 dimerization domain 107 residues - Formula weight is not available

1

MET

ALA

SER

ASN

LEU

LYS

ILE

VAL

ARG

MET

2

ASP

ARG

THR

ALA

GLY

CYS

VAL

THR

GLY

3

GLU

ILE

TYR

LEU

CYS

ASP

LYS

VAL

4

GLN

LYS

ASP

ILE

GLN

ILE

ARG

PHE

TYR

5

GLU

ASN

GLY

VAL

TRP

GLU

6

GLY

PHE

GLY

ASP

PHE

SER

PRO

THR

ASP

VAL

7

HIS

ARG

GLN

PHE

ALA

ILE

VAL

PHE

LYS

THR

8

PRO

LYS

TYR

LYS

ASP

VAL

ASN

ILE

THR

LYS

9

PRO

ALA

SER

VAL

PHE

VAL

GLN

LEU

ARG

10

LYS

SER

ASP

LEU

GLU

THR

SER

GLU

PRO

LYS

11

PRO

PHE

LEU

TYR

PRO

GLU

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_2	isotropic	sample_conditions_1
2D 1H-13C HSQC	sample_1	isotropic	sample_conditions_1
3D HNCO	sample_3	isotropic	sample_conditions_1
3D HNCA	sample_3	isotropic	sample_conditions_1
3D HNCACB	sample_3	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_3	isotropic	sample_conditions_1
3D HN(CO)CA	sample_3	isotropic	sample_conditions_1
3D 1H-15N NOESY	sample_2	isotropic	sample_conditions_1

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks

BMRB Entry 27895

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers: