BMRB Entry 28025

Name: human_CIRBP_138-172
Published: 2020-04-03

Chem Shift validation: AVS_anomalous, AVS_full
BMRB Entry DOI: doi:10.13018/BMR28025

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3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title: human_CIRBP_138-172 PubMed: 32234784

Deposition date: 2019-10-04 Original release date: 2020-04-03

Authors: Bourgeois, Benjamin; Madl, Tobias

Citation: Bourgeois, Benjamin; Hutten, Saskia; Gottschalk, Benjamin; Hofweber, Mario; Richter, Gesa; Sternat, Julia; Abou-Ajram, Claudia; Gobl, Christoph; Leitinger, Gerd; Graier, Wolfgang; Dormann, Dorothee; Madl, Tobias. "Nonclassical nuclear localization signals mediate nuclear import of CIRBP" Proc. Natl. Acad. Sci. U.S.A. 117, 8503-8514 (2020).

Assembly members:
CIRBP, polymer, 38 residues, Formula weight is not available

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pETM-11

Entity Sequences (FASTA):
CIRBP: GAMSRDYYSSRSQSGGYSDR SSGGSYRDSYDSYATHNE

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
15N chemical shifts	35
1H chemical shifts	35

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	CIRBP_138-172	1

Entities:

Entity 1, CIRBP_138-172 38 residues - Formula weight is not available

1

GLY

ALA

MET

SER

ARG

ASP

TYR

SER

2

ARG

SER

GLN

SER

GLY

TYR

SER

ASP

ARG

3

SER

GLY

SER

TYR

ARG

ASP

SER

TYR

4

ASP

SER

TYR

ALA

THR

HIS

ASN

GLU

Samples:

sample_1: CIRBP, [U-99% 13C; U-99% 15N], 500 uM; D2O 10%; TRIS 50 mM; sodium chloride 150 mM

sample_conditions_1: ionic strength: 0.15 M; pH: 6.7; pressure: 1 atm; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
3D HNCACB	sample_1	isotropic	sample_conditions_1
3D HNCANNH	sample_1	isotropic	sample_conditions_1

Software:

CCPN, CCPN - collection, peak picking

NMR spectrometers:

Bruker Avance 600 MHz

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated shifts
SPARKY: Backbone or all simulated shifts