BMRB Entry 34660

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PDB ID: 7pjl
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR34660
MolProbity Validation Chart

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Title:
Solution structure of Zipcode binding protein 1 (ZBP1) KH3(DD)KH4 domains in complex with N6-Methyladenosine containing RNA
Deposition date:
2021-08-24
Original release date:
2024-01-31
Authors:
Nicastro, G.; Abis, G.; Taylor, I.; Ramos, A.
Citation:

Citation: Nicastro, G.; Candel, A.; Uhl, M.; Oregioni, A.; Hollingworth, D.; Backofen, R.; Martin, S.; Ramos, A.. "Mechanism of b-actin mRNA Recognition by ZBP1."  Cell Rep. 18, 1187-1199 (2017).
PubMed: 28147274

Assembly members:

Assembly members:
entity_1, polymer, 191 residues, 20613.498 Da.
entity_2, polymer, 7 residues, 2211.382 Da.

Natural source:

Natural source:   Common Name: Chicken   Taxonomy ID: 9031   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Gallus gallus

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli

Entity Sequences (FASTA):

Entity Sequences (FASTA):
entity_1: GAMGPSSVSGAAPFSSFMPP EQETVHVFIPAQAVGAIIGD DGQHIKQLSRFASASIKIAP PETPDSKVRMVVITGPPEAQ FKAQGRIYGKLKEENFFGPK EEVKLETHIRVPASAAGRVI GKGGKTVNELQNLTAAEVVV PRDQTPDENEQVIVKIIGHF YASQMAQRKIRDILAQVKQQ HQKGQSGQLQA
entity_2: UCGGXCU

Data sets:
Data typeCount
13C chemical shifts439
1H chemical shifts1033

Additional metadata:

  • Assembly
  • Samples and Experiments
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Assembly:

Entity Assembly IDEntity NameEntity ID
1unit_11
2unit_22

Entities:

Entity 1, unit_1 191 residues - 20613.498 Da.

1   GLYALAMETGLYPROSERSERVALSERGLY
2   ALAALAPROPHESERSERPHEMETPROPRO
3   GLUGLNGLUTHRVALHISVALPHEILEPRO
4   ALAGLNALAVALGLYALAILEILEGLYASP
5   ASPGLYGLNHISILELYSGLNLEUSERARG
6   PHEALASERALASERILELYSILEALAPRO
7   PROGLUTHRPROASPSERLYSVALARGMET
8   VALVALILETHRGLYPROPROGLUALAGLN
9   PHELYSALAGLNGLYARGILETYRGLYLYS
10   LEULYSGLUGLUASNPHEPHEGLYPROLYS
11   GLUGLUVALLYSLEUGLUTHRHISILEARG
12   VALPROALASERALAALAGLYARGVALILE
13   GLYLYSGLYGLYLYSTHRVALASNGLULEU
14   GLNASNLEUTHRALAALAGLUVALVALVAL
15   PROARGASPGLNTHRPROASPGLUASNGLU
16   GLNVALILEVALLYSILEILEGLYHISPHE
17   TYRALASERGLNMETALAGLNARGLYSILE
18   ARGASPILELEUALAGLNVALLYSGLNGLN
19   HISGLNLYSGLYGLNSERGLYGLNLEUGLN
20   ALA

Entity 2, unit_2 7 residues - 2211.382 Da.

1   UCGG6MZCU