BMRB Entry 34757

Name: Antimicrobial peptide capitellacin from polychaeta Capitella teleta in DPC (dodecylphosphocholine) micelles, dimeric form
Published: 2023-10-16

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PDB ID: 8b4s
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR34757
MolProbity Validation Chart

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Antimicrobial peptide capitellacin from polychaeta Capitella teleta in DPC (dodecylphosphocholine) micelles, dimeric form

Deposition date:

2022-09-21

Original release date:

2023-10-16

Authors:

Mironov, P.; Reznikova, O.; Paramonov, A.; Shenkarev, Z.

Citation:

Citation: Mironov, P.; Paramonov, A.; Reznikova, O.; Shenkarev, Z.. "Antimicrobial peptide capitellacin from polychaeta Capitella teleta in DPC (dodecylphosphocholine) micelles, dimeric form" .

Assembly members:

Assembly members:
entity_1, polymer, 20 residues, 2388.888 Da.

Natural source:

Natural source: Common Name: segmented worms Taxonomy ID: 283909 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Capitella teleta

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli BL21(DE3) Vector: pET

Entity Sequences (FASTA):

Entity Sequences (FASTA):
entity_1: SPRVCIRVCRNGVCYRRCWG

Data sets:

assigned_chemical_shifts
- assigned_chemical_shifts_1

Data type	Count
13C chemical shifts	96
15N chemical shifts	21
1H chemical shifts	268

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	unit_1	1
2	unit_2	1

Entities:

Entity 1, unit_1 20 residues - 2388.888 Da.

1		SER	PRO	ARG	VAL	CYS	ILE	ARG	VAL	CYS	ARG
2		ASN	GLY	VAL	CYS	TYR	ARG	ARG	CYS	TRP	GLY

Name	Sample	Sample state	Sample conditions
2D NOESY	sample_1	anisotropic	sample_conditions_1
2D 1H-1H TOCSY	sample_1	anisotropic	sample_conditions_1
2D 1H-13C HSQC aliphatic	sample_1	anisotropic	sample_conditions_1
2D 1H-13C HSQC aromatic	sample_1	anisotropic	sample_conditions_1
2D 1H-15N HSQC	sample_1	anisotropic	sample_conditions_1

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SPARKY: Backbone or all simulated peaks

BMRB Entry 34757

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

1		SER	PRO	ARG	VAL	CYS	ILE	ARG	VAL	CYS	ARG
2		ASN	GLY	VAL	CYS	TYR	ARG	ARG	CYS	TRP	GLY

1		SER	PRO	ARG	VAL	CYS	ILE	ARG	VAL	CYS	ARG
2		ASN	GLY	VAL	CYS	TYR	ARG	ARG	CYS	TRP	GLY

1		SER	PRO	ARG	VAL	CYS	ILE	ARG	VAL	CYS	ARG
2		ASN	GLY	VAL	CYS	TYR	ARG	ARG	CYS	TRP	GLY