BMRB Entry 34767

Title:
NMR Structure of Big-defensin 5 from oyster Crassostrea gigas
Deposition date:
2022-10-27
Original release date:
2022-12-09
Authors:
Loth, K.; Asokan, A.
Citation:

Citation: Asokan, A.; Delmas, A.; Aucagne, V.; Loth, K.; Meudal, H.. "Total synthesis and 3D structure determination of a highly hydrophobic antimicrobial Crassostrea gigas big defensin, enduring challenges rescue by a solubilizing tag"  .

Assembly members:

Assembly members:
entity_1, polymer, 86 residues, 9977.422 Da.

Natural source:

Natural source:   Common Name: Pacific oyster   Taxonomy ID: 29159   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Crassostrea gigas

Experimental source:

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):

Data sets:
Data typeCount
13C chemical shifts256
15N chemical shifts73
1H chemical shifts586

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1unit_11

Entities:

Entity 1, unit_1 86 residues - 9977.422 Da.

1   TRPALAGLNALALEULEUPROILETRPTHR
2   TYRTHRGLNNLETHRVALSERALAPROLEU
3   PHEALAALALEUVALALAALATYRGLYILE
4   TYRALAVALTHRARGTYRGLYILELYSLYS
5   ALAARGTHRARGASNASPSERHISGLNCYS
6   ALAASNASNARGGLYTRPCYSARGLYSSER
7   CYSPHEGLYHISGLUTYRILEASPTRPTYR
8   TYRTHRASPVALCYSGLYSERPHETYRCYS
9   CYSARGPROARGASNNLW

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks