BMRB Entry 34798

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PDB ID: 8ofc
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR34798
MolProbity Validation Chart

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Title:
Structure of an i-motif domain with the cytosine analog 1,3-diaza-2-oxophenoxacione (tC) at neutral pH
Deposition date:
2023-03-15
Original release date:
2024-02-02
Authors:
Mir, B.; Serrano-Chacon, I.; Terrazas, M.; Gandioso, A.; Garavis, M.; Orozco, M.; Escaja, N.; Gonzalez, C.
Citation:

Citation: Mir, Bartomeu; Serrano-Chacon, Israel; Medina, Pedro; Macaluso, Veronica; Terrazas, Montserrat; Gandioso, Albert; Garavis, Miguel; Orozco, Modesto; Escaja, Nuria; Gonzalez, Carlos. "Site-specific incorporation of a fluorescent nucleobase analog enhances i-motif stability and allows monitoring of i-motif folding inside cells"  Nucleic Acids Res. 52, 3375-3389 (2024).
PubMed: 38366792

Assembly members:

Assembly members:
entity_1, polymer, 22 residues, 6719.344 Da.

Natural source:

Natural source:   Common Name: not available   Taxonomy ID: 32630   Superkingdom: not available   Kingdom: not available   Genus/species: synthetic construct

Experimental source:

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
entity_1: CXGTTCXGTTTTTCCGTTCX GT

Data sets:
Data typeCount
1H chemical shifts177

Additional metadata:

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Assembly:

Entity Assembly IDEntity NameEntity ID
1unit_11

Entities:

Entity 1, unit_1 22 residues - 6719.344 Da.

1   DCYCODGDTDTDCDNRDGDTDT
2   DTDTDTDCDCDGDTDTDCDNR
3   DGDT