BMRB Entry 36124
Click here to enlarge.
PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR36124
MolProbity Validation Chart
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry
Title: Antimicrobial peptide Andersonin-Y1 (AY1) PubMed: 30872680
Deposition date: 2017-10-15 Original release date: 2018-07-11
Authors: Pal, I.; Atreya, H.; Bhunia, A.
Citation: Pal, Indrani; Bhattacharyya, Dipita; Kar, Rajiv Kumar; Zarena, D.; Bhunia, Anirban; Atreya, Hanudatta. "A Peptide-Nanoparticle System with Improved Efficacy against Multidrug Resistant Bacteria" Sci. Rep. 9, 4485-4485 (2019).
Assembly members:
entity_1, polymer, 18 residues, 2162.727 Da.
Natural source: Common Name: golden crossband frog Taxonomy ID: 369514 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Odorrana andersonii
Experimental source: Production method: chemical synthesis
Entity Sequences (FASTA):
entity_1: FLPKLFAKITKKNMAHIR
- assigned_chemical_shifts
- spectral_peak_list
| Data type | Count |
| 1H chemical shifts | 109 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | entity_1 | 1 |
Entities:
Entity 1, entity_1 18 residues - 2162.727 Da.
| 1 | PHE | LEU | PRO | LYS | LEU | PHE | ALA | LYS | ILE | THR | ||||
| 2 | LYS | LYS | ASN | MET | ALA | HIS | ILE | ARG |
Samples:
sample_1: PEPTIDE 2 mM; H2O 90%; D2O, [U-2H], 10%
sample_conditions_1: ionic strength: 2 mM; pH: 6; pressure: 1 atm; temperature: 298 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 2D 1H-1H NOESY | sample_1 | isotropic | sample_conditions_1 |
Software:
CYANA, Guntert, Mumenthaler and Wuthrich - structure calculation
XEASY, Bartels et al. - chemical shift assignment, peak picking
NMR spectrometers:
- Bruker Avance 800 MHz