BMRB Entry 4240

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR4240

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Title:
Minor conformer of a benzo[a]pyrene diol epoxide adduct of DA in duplex DNA
Deposition date:
1998-10-08
Original release date:
2000-05-01
Authors:
Schwartz, J.; Rice, J.; Luxon, B.; Sayer, J.; Xie, G.; Yeh, H.; Liu, X.; Jerina, D.; Gorenstein, D.
Citation:

Citation: Schwartz, J.; Rice, J.; Luxon, B.; Sayer, J.; Xie, G.; Yeh, H.; Liu, X.; Jerina, D.; Gorenstein, D.. "Solution structure of the minor conformer of a DNA duplex containing a DG mismatch opposite a benzo[a]pyrene diol epoxide/DA adduct: glycosidic rotation from syn to anti at the modified deoxyadenosine"  Biochemistry 36, 11069-11076 (1997).

Assembly members:

Assembly members:
5'-D(GP*GP*TP*CP*AP*CP*GP*AP*G)-3', polymer, 9 residues, Formula weight is not available
(5'-D(CP*TP*CP*GP*GP*GP*AP*CP*C)-3', polymer, 9 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: not available   Taxonomy ID: not available   Superkingdom: not available   Kingdom: not available   Genus/species: not available not available

Experimental source:

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
5'-D(GP*GP*TP*CP*AP*CP*GP*AP*G)-3': GGTCXCGAG
(5'-D(CP*TP*CP*GP*GP*GP*AP*CP*C)-3': CTCGGGACC

Data sets:
Data typeCount
1H chemical shifts109

Additional metadata:

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  • Samples and Experiments
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Assembly:

Entity Assembly IDEntity NameEntity ID
1DNA Strand A1
2DNA Strand B2

Entities:

Entity 1, DNA Strand A 9 residues - Formula weight is not available

1   DGDGDTDCABPDCDGDADG

Entity 2, DNA Strand B 9 residues - Formula weight is not available

1   DCDTDCDGDGDGDADCDC