BMRB Entry 4536
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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR4536
MolProbity Validation Chart
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry
Citation: Ghosh, M.; Kumar1, V.; Varshney, U.; Chary, K.. "Structural basis for uracil DNA glycosylase interaction with uracil: NMR study" Nucleic Acids Res. 28, 1906-1912 (2000).
Assembly members:
URACIL CONTAINING HAIRPIN DNA, polymer, 22 residues, Formula weight is not available
Natural source: Common Name: not available Taxonomy ID: not available Superkingdom: not available Kingdom: not available Genus/species: not available not available
Experimental source: Production method: not reported
Entity Sequences (FASTA):
URACIL CONTAINING HAIRPIN DNA: CTAGAGGATCCTXTTGGATC
CT
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 183 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | DNA hairpin | 1 |
Entities:
Entity 1, DNA hairpin 22 residues - Formula weight is not available
| 1 | DC | DT | DA | DG | DA | DG | DG | DA | DT | DC | ||||
| 2 | DC | DT | DUR | DT | DT | DG | DG | DA | DT | DC | ||||
| 3 | DC | DT |
Samples:
sample_1: URACIL CONTAINING HAIRPIN DNA 5 mM; D2O 99%
sample_2: URACIL CONTAINING HAIRPIN DNA 5 mM; D2O 10%; H2O 90%
sample_cond_1: pH: 7.0; pressure: 1 atm; temperature: 305 K
sample_cond_2: pH: 7.0; pressure: 1 atm; temperature: 295 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 2D NOESY | not available | not available | not available |
| E-COSY | not available | not available | not available |
Software:
VNMR v6.1 - COLLECTION, DATA ANALYSIS
DISCOVER v97 - STRUCTURE SOLUTION
UXNMR v3.0 - COLLECTION
FELIX v97 - DATA ANALYSIS, PROCESSING
NMR spectrometers:
- BRUKER AMX 500 MHz