BMRB Entry 4630

Title:
NMR STRUCTURE OF THROMBOMODULIN EGF(4-5)
Deposition date:
2000-01-03
Original release date:
2001-05-07
Authors:
Wood, M.; Sampoli-Benitez, B.; Komives, E.
Citation:

Citation: Wood, M.; Sampoli-Benitez, B.; Komives, E.. "Solution structure of the smallest cofactor-active fragment of thrombomodulin"  Nat. Struct. Biol. 7, 200-204 (2000).
PubMed: 10700277

Assembly members:

Assembly members:
THROMBOMODULIN, polymer, 83 residues, Formula weight is not available
NAG, non-polymer, 221.208 Da.

Natural source:

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Pichia pastoris

Entity Sequences (FASTA):

Data sets:
Data typeCount
coupling constants43

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1THROMBOMODULIN1
2N-ACETYL-D-GLUCOSAMINE-12
3N-ACETYL-D-GLUCOSAMINE-22

Entities:

Entity 1, THROMBOMODULIN 83 residues - Formula weight is not available

1   HISMETGLUPROVALASPPROCYSPHEARG
2   ALAASNCYSGLUTYRGLNCYSGLNPROLEU
3   ASNGLNTHRSERTYRLEUCYSVALCYSALA
4   GLUGLYPHEALAPROILEPROHISGLUPRO
5   HISARGCYSGLNMETPHECYSASNGLNTHR
6   ALACYSPROALAASPCYSASPPROASNTHR
7   GLNALASERCYSGLUCYSPROGLUGLYTYR
8   ILELEUASPASPGLYPHEILECYSTHRASP
9   ILEASPGLU

Entity 2, N-ACETYL-D-GLUCOSAMINE-1 - C8 H15 N O6 - 221.208 Da.

1   NAG

Related Database Links:

PDB 1DQB 1DX5 1ZAQ 3GIS
DBJ BAA00149 BAG53913 BAJ17754
EMBL CAA29045
GB AAA61175 AAB27209 AAB59508 AAD49735 AAH35602
PRF 1403353A
REF NP_000352 XP_003829427 XP_525283
SP P07204 Q71U07
AlphaFold P07204 Q71U07