BMRB Entry 4692

Name: SOLUTION STRUCTURE OF A HUMAN TELOMERE FRAGMENT
Published: 2001-03-02

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PDB ID: 1el2
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR4692
MolProbity Validation Chart

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Nicholas Rego and David Koes
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

SOLUTION STRUCTURE OF A HUMAN TELOMERE FRAGMENT

Deposition date:

2000-03-17

Original release date:

2001-03-02

Authors:

Phan, A.; Gueron, M.; Leroy, J.

Citation:

Citation: Phan, A.; Gueron, M.; Leroy, J.. "The solution structure and internal motions of a fragment of the cytidine-rich strand of the human telomere" J. Mol. Biol. 299, 123-144 (2000).
PubMed: 10860727

Assembly members:

Assembly members:
5'-D(*CP*CP*CP*TP*AP*AP*(5MC)P*CP*CP*TP*AP*AP*CP*CP*CP*UP*AP*AP*CP*CP*CP*T)-3', polymer, 22 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: chemical synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
5'-D(*CP*CP*CP*TP*AP*AP*(5MC)P*CP*CP*TP*AP*AP*CP*CP*CP*UP*AP*AP*CP*CP*CP*T)-3': XXXTAAXCCTAACCCXAAXX XT

Data sets:

assigned_chemical_shifts

Data type	Count
1H chemical shifts	245
31P chemical shifts	21

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	5'-D(CPCPCPTPAPAP(5MC)PCPCPTPAPAPCPCPCPUPAPAPCPCPCPT)-3'	1

Entities:

Entity 1, 5'-D(*CP*CP*CP*TP*AP*AP*(5MC)P*CP*CP*TP*AP*AP*CP*CP*CP*UP*AP*AP*CP*CP*CP*T)-3' 22 residues - Formula weight is not available

1

CH

DT

DA

5MC

DC

DT

2

DA

DC

DU

DA

CH

3

CH

DT

Samples:

sample_1: 5'-D(*CP*CP*CP*TP*AP*AP*(5MC)P*CP*CP*TP*AP*AP*CP*CP*CP*UP*AP*AP*CP*CP*CP*T)-3'1.5 – 4 mM

sample_cond_1: pH: 5; temperature: 303 K; ionic strength: 10 mM; pressure: 1 atm

Experiments:

Name	Sample	Sample state	Sample conditions
NOESY	sample_1	not available	sample_cond_1
COSY	sample_1	not available	sample_cond_1
TOCSY	sample_1	not available	sample_cond_1
31P-1H hetero-TOCSY	sample_1	not available	sample_cond_1
13C-1H HSQC	sample_1	not available	sample_cond_1
HMBC	sample_1	not available	sample_cond_1
JRHMBC	sample_1	not available	sample_cond_1

Software:

X-PLOR v3.851 - refinement

NMR spectrometers:

Bruker Avance 800 MHz