BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 4766

Title: Backbone and partial side chain resonance assignments of Vesl-1S

Deposition date: 2000-06-19 Original release date: 2000-10-30

Authors: Tanaka, Takeshi

Citation: Tanaka, Takeshi; Sugai, Mariko; Ito, Yutaka; Inokuchi, Kaoru; Kohno, Toshiyuki. "Letter to the Editor: Assignments of the 1H, 13C, and 15N resonances of the 21 kDa Vesl/Homer family protein, Vesl-1S"  J. Biomol. NMR 18, 181-182 (2000).

Assembly members:
Vesl-1S, polymer, 188 residues, Formula weight is not available

Natural source:   Common Name: rat   Taxonomy ID: 10116   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Rattus norvegicus

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli

Entity Sequences (FASTA):
Vesl-1S: GPMGEQPIFSTRAHVFQIDP NTKKNWVPTSKHAVTVSYFY DSTRNVYRIISLDGSKAIIN STITPNMTFTKTSQKFGQWA DSRANTVYGLGFSSEHHLSK FAEKFQEFKEAARLAKEKSQ EKMELTSTPSQESAGGDLQS PLTPESINGTDDERTPDVTQ NSEPRAEPAQNALPFSHRYT FNSAIMIK

Data sets:
Data typeCount
1H chemical shifts685
13C chemical shifts528
15N chemical shifts165

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1Vesl-1S1

Entities:

Entity 1, Vesl-1S 188 residues - Formula weight is not available

1   GLYPROMETGLYGLUGLNPROILEPHESER
2   THRARGALAHISVALPHEGLNILEASPPRO
3   ASNTHRLYSLYSASNTRPVALPROTHRSER
4   LYSHISALAVALTHRVALSERTYRPHETYR
5   ASPSERTHRARGASNVALTYRARGILEILE
6   SERLEUASPGLYSERLYSALAILEILEASN
7   SERTHRILETHRPROASNMETTHRPHETHR
8   LYSTHRSERGLNLYSPHEGLYGLNTRPALA
9   ASPSERARGALAASNTHRVALTYRGLYLEU
10   GLYPHESERSERGLUHISHISLEUSERLYS
11   PHEALAGLULYSPHEGLNGLUPHELYSGLU
12   ALAALAARGLEUALALYSGLULYSSERGLN
13   GLULYSMETGLULEUTHRSERTHRPROSER
14   GLNGLUSERALAGLYGLYASPLEUGLNSER
15   PROLEUTHRPROGLUSERILEASNGLYTHR
16   ASPASPGLUARGTHRPROASPVALTHRGLN
17   ASNSERGLUPROARGALAGLUPROALAGLN
18   ASNALALEUPROPHESERHISARGTYRTHR
19   PHEASNSERALAILEMETILELYS

Samples:

sample_1: Vesl-1S, [U-99% 13C; U-99% 15N], 1 – 1.3 mM

Ex-cond_1: pH: 6.5; temperature: 303 K

Experiments:

NameSampleSample stateSample conditions
1H-15N HSQCnot availablenot availablenot available
CBCA(CO)NNHnot availablenot availablenot available
HNCACBnot availablenot availablenot available
HNCAnot availablenot availablenot available
HN(CO)CAnot availablenot availablenot available
HNCOnot availablenot availablenot available
HN(CA)COnot availablenot availablenot available
HBHA(CBCACO)NNHnot availablenot availablenot available
H(CACO)NNHnot availablenot availablenot available
HCCH-TOCSYnot availablenot availablenot available

Software:

No software information available

NMR spectrometers:

  • Bruker DRX 500 MHz
  • Bruker DRX 600 MHz

Related Database Links:

PDB
DBJ BAA21671 BAA32477 BAA34311 BAA34353 BAA34354
EMBL CAA76877 CAB77249 CAB77250 CAH90340
GB AAC53113 AAC71021 AAC71022 AAC71026 AAC71031
REF NP_001069520 NP_001125162 NP_001230740 NP_001248499 NP_001264006
SP Q2KJ56 Q86YM7 Q9Z214 Q9Z2Y3
TPG DAA25767
AlphaFold Q9Z2Y3 Q86YM7 Q2KJ56 Q9Z214

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated shifts
SPARKY: Backbone or all simulated shifts