BMRB Entry 4780

Title:
NMR Structure of Stem-loop SL2 of the HIV-1 Psi RNA Packaging Signal Reveals a Novel A-U-A Base-triple Platform
Deposition date:
2000-07-10
Original release date:
2002-04-04
Authors:
Amarasinghe, Gaya; De Guzman, Roberto; Turner, Ryan; Summers, Michael
Citation:

Citation: Amarasinghe, Gaya; De Guzman, Roberto; Turner, Ryan; Summers, Michael. "NMR Structure of Stem-loop SL2 of the HIV-1 Psi RNA Packaging Signal Reveals a Novel A-U-A Base-triple Platform"  J. Mol. Biol. 299, 145-156 (2000).
PubMed: 10860728

Assembly members:

Assembly members:
HIV-1 SL2 stem loop, polymer, 19 residues, 6371 Da.

Natural source:

Natural source:   Common Name: HIV-1   Taxonomy ID: 12721   Superkingdom: viruses   Kingdom: not available   Genus/species: Lentivirus Human Immunodeficiency virus

Experimental source:

Experimental source:   Production method: enzymatic semisynthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
HIV-1 SL2 stem loop: GGCGACUGGUGAGUACGCC

Data sets:
  • assigned_chemical_shifts
Data typeCount
13C chemical shifts106
1H chemical shifts134

Additional metadata:

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Assembly:

Entity Assembly IDEntity NameEntity ID
1SL21

Entities:

Entity 1, SL2 19 residues - 6371 Da.

1   GGCGACUGGU
2   GAGUACGCC