BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 4820

Title: 1H and 13Ca Chemical Shift Assignments for the Pheromone Er-22

Deposition date: 2000-09-06 Original release date: 2001-01-29

Authors: Liu, Aizhuo; Luginbuhl, Peter; Zerbe, Oliver; Luporini, Pierangelo; Wuthrich, Kurt

Citation: Liu, Aizhuo; Luginbuhl, Peter; Zerbe, Oliver; Ortenzi, Claudio; Luporini, Pierangelo; Wuthrich, Kurt. "Letter to the Editor: NMR structure of the pheromone Er-22 from Euplotes raikovi"  J. Biomol. NMR 19, 75-78 (2001).

Assembly members:
Pheromone Er-22, polymer, 37 residues, Formula weight is not available

Natural source:   Common Name: not available   Taxonomy ID: 5938   Superkingdom: Eukaryota   Kingdom: not available   Genus/species: Euplotes raikovi

Experimental source:   Production method: purified from the natural source

Entity Sequences (FASTA):
Pheromone Er-22: DICDIAIAQCSLTLCQDCEN TPICELAVKGSCPPPWS

Data sets:
Data typeCount
13C chemical shifts37
1H chemical shifts245

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1Er-221

Entities:

Entity 1, Er-22 37 residues - Formula weight is not available

1   ASPILECYSASPILEALAILEALAGLNCYS
2   SERLEUTHRLEUCYSGLNASPCYSGLUASN
3   THRPROILECYSGLULEUALAVALLYSGLY
4   SERCYSPROPROPROTRPSER

Samples:

H2O_sample: Pheromone Er-22 6.5 mM; H2O 90%; D2O 10%

D2O_sample: Pheromone Er-22 6.5 mM; D2O 100%

Exp-cond: pH: 5.0; temperature: 296 K

Experiments:

NameSampleSample stateSample conditions
2QF-COSYnot availablenot availableExp-cond
clean-TOCSYnot availablenot availableExp-cond
2Q-spectrumnot availablenot availableExp-cond
E.COSYnot availablenot availableExp-cond
NOESYnot availablenot availableExp-cond
13C-1H HSQCnot availablenot availableExp-cond

Software:

PROSA - spectral processing

XEASY - resonance assignment

DIANA - structure calculation

OPAL - restrained energy refinement

NMR spectrometers:

  • Bruker AMX 600 MHz
  • Varian Unity-plus 750 MHz

Related Database Links:

PDB
SWISS-PROT P58548