BMRB Entry 50887
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR50887
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Title: Backbone Assignments of HNH Nuclease from G. stearothermophilus Cas9 PubMed: 34871741
Deposition date: 2021-04-09 Original release date: 2021-12-14
Authors: Belato, Helen
Citation: Belato, Helen; D'Ordine, Alexandra; Nierzwicki, Lukasz; Arantes, Pablo; Jogl, Gerwald; Palermo, Giulia; Lisi, George. "Structural and dynamic insights into the HNH nuclease of divergent Cas9 species" J. Struct. Biol. 214, 107814-107814 (2021).
Assembly members:
entity_1, polymer, 108 residues, Formula weight is not available
Natural source: Common Name: Geobacillus stearothermophilus Taxonomy ID: 1422 Superkingdom: Bacteria Kingdom: not available Genus/species: Geobacillus stearothermophilus
Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET28a+
Entity Sequences (FASTA):
entity_1: TGHDIVKFKLWSEQNGRCAY
SLQPIEIERLLEPGYVEVDH
VIPYSRSLDDSYTNKVLVLT
RENREKGNRIPAEYLGVGTE
RWQQFETFVLTNKQFSKKKR
DRLLRLHY
- assigned_chemical_shifts
| Data type | Count |
| 13C chemical shifts | 245 |
| 15N chemical shifts | 85 |
| 1H chemical shifts | 85 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | HNH | 1 |
Entities:
Entity 1, HNH 108 residues - Formula weight is not available
| 1 | THR | GLY | HIS | ASP | ILE | VAL | LYS | PHE | LYS | LEU | ||||
| 2 | TRP | SER | GLU | GLN | ASN | GLY | ARG | CYS | ALA | TYR | ||||
| 3 | SER | LEU | GLN | PRO | ILE | GLU | ILE | GLU | ARG | LEU | ||||
| 4 | LEU | GLU | PRO | GLY | TYR | VAL | GLU | VAL | ASP | HIS | ||||
| 5 | VAL | ILE | PRO | TYR | SER | ARG | SER | LEU | ASP | ASP | ||||
| 6 | SER | TYR | THR | ASN | LYS | VAL | LEU | VAL | LEU | THR | ||||
| 7 | ARG | GLU | ASN | ARG | GLU | LYS | GLY | ASN | ARG | ILE | ||||
| 8 | PRO | ALA | GLU | TYR | LEU | GLY | VAL | GLY | THR | GLU | ||||
| 9 | ARG | TRP | GLN | GLN | PHE | GLU | THR | PHE | VAL | LEU | ||||
| 10 | THR | ASN | LYS | GLN | PHE | SER | LYS | LYS | LYS | ARG | ||||
| 11 | ASP | ARG | LEU | LEU | ARG | LEU | HIS | TYR |
Samples:
sample_1: GeoHNH, [U-100% 13C; U-100% 15N], 750 uM; HEPES 20 mM; potassium chloride 80 mM; DTT 1 mM; glycerol 5%; EDTA 1 mM
sample_conditions_1: pH: 7.4; pressure: 1 atm; temperature: 298 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 2D 1H-15N HSQC | sample_1 | isotropic | sample_conditions_1 |
| 3D HNCA | sample_1 | isotropic | sample_conditions_1 |
| 3D HN(CO)CA | sample_1 | isotropic | sample_conditions_1 |
| 3D HNCACB | sample_1 | isotropic | sample_conditions_1 |
| 3D HN(CO)CACB | sample_1 | isotropic | sample_conditions_1 |
| 3D HN(CA)CO | sample_1 | isotropic | sample_conditions_1 |
| 3D HNCO | sample_1 | isotropic | sample_conditions_1 |
Software:
NMRPipe - processing
NMR spectrometers:
- Bruker AVANCE III 850 MHz
- Bruker AVANCE NEO 600 MHz
Download HSQC peak lists in one of the following formats:
CSV: Backbone
or all simulated shifts
SPARKY: Backbone
or all simulated shifts