BMRB Entry 51268

Title:
Backbone chemical shift assignment of the SARS-CoV-2 receptor binding domain
Deposition date:
2022-01-12
Original release date:
2022-07-14
Authors:
Creutznacher, Robert; Peters, Thomas
Citation:

Citation: Creutznacher, Robert; Maass, Thorben; Veselkova, Barbora; Ssebyatika, George; Krey, Thomas; Empting, Martin; Tautz, Norbert; Frank, Martin; Kolbel, Knut; Uetrecht, Charlotte; Peters, Thomas. "NMR Experiments Provide Insights into Ligand-Binding to the SARS-CoV-2 Spike Protein Receptor-Binding Domain"  J. Am. Chem. Soc. 144, 13060-13065 (2022).
PubMed: 35830336

Assembly members:

Assembly members:
entity_1, polymer, 225 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: SARS-CoV-2   Taxonomy ID: 2697049   Superkingdom: Viruses   Kingdom: not available   Genus/species: Betacoronavirus HCoV-SARS

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: pMalC2x

Data sets:
Data typeCount
13C chemical shifts604
15N chemical shifts197
1H chemical shifts197

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1RBD1

Entities:

Entity 1, RBD 225 residues - Formula weight is not available

Residues 1-2 ("GP") belong to a proteolytic cleavage site and are not present in the native SARS-CoV-2 spike protein.

1   GLYPROARGVALGLNPROTHRGLUSERILE
2   VALARGPHEPROASNILETHRASNLEUCYS
3   PROPHEGLYGLUVALPHEASNALATHRARG
4   PHEALASERVALTYRALATRPASNARGLYS
5   ARGILESERASNCYSVALALAASPTYRSER
6   VALLEUTYRASNSERALASERPHESERTHR
7   PHELYSCYSTYRGLYVALSERPROTHRLYS
8   LEUASNASPLEUCYSPHETHRASNVALTYR
9   ALAASPSERPHEVALILEARGGLYASPGLU
10   VALARGGLNILEALAPROGLYGLNTHRGLY
11   LYSILEALAASPTYRASNTYRLYSLEUPRO
12   ASPASPPHETHRGLYCYSVALILEALATRP
13   ASNSERASNASNLEUASPSERLYSVALGLY
14   GLYASNTYRASNTYRLEUTYRARGLEUPHE
15   ARGLYSSERASNLEULYSPROPHEGLUARG
16   ASPILESERTHRGLUILETYRGLNALAGLY
17   SERTHRPROCYSASNGLYVALGLUGLYPHE
18   ASNCYSTYRPHEPROLEUGLNSERTYRGLY
19   PHEGLNPROTHRASNGLYVALGLYTYRGLN
20   PROTYRARGVALVALVALLEUSERPHEGLU
21   LEULEUHISALAPROALATHRVALCYSGLY
22   PROLYSLYSSERTHRASNLEUVALLYSASN
23   LYSSERVALASNPHE

Related Database Links:

NCBI YP_009724390.1

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks