BMRB Entry 51600
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR51600
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Title: BIR2 domain of Xiap PubMed: 37673444
Deposition date: 2022-08-29 Original release date: 2023-08-22
Authors: Favier, Adrien; Pellegrini, Erika
Citation: Lethier, Mathilde; Hons, Michael; Favier, Adrien; Brutscher, Bernhard; Boeri Erba, Elisabetta; Cusack, Stephen; Pellegrini, Erika. "Structure shows that the BIR2 domain of E3 ligase XIAP binds across the RIPK2 kinase dimer interface" Life Sci. Alliance 6, e202201784-e202201784 (2023).
Assembly members:
entity_1, polymer, 117 residues, Formula weight is not available
Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens
Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pcDNA3
Entity Sequences (FASTA):
entity_1: RDHFALDRPSETHADYLLRT
GQVVDISDTIYPRNPAMYSE
EARLKSFQNWPDYAHLTPRE
LASAGLYYTGIGDQVQCFAC
GGKLKNWEPGDRAWSEHRRH
FPNCFFVLGRNLNIRSE
- assigned_chemical_shifts
| Data type | Count |
| 13C chemical shifts | 154 |
| 15N chemical shifts | 84 |
| 1H chemical shifts | 84 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | Xiap-BIR2 | 1 |
Entities:
Entity 1, Xiap-BIR2 117 residues - Formula weight is not available
| 1 | ARG | ASP | HIS | PHE | ALA | LEU | ASP | ARG | PRO | SER | ||||
| 2 | GLU | THR | HIS | ALA | ASP | TYR | LEU | LEU | ARG | THR | ||||
| 3 | GLY | GLN | VAL | VAL | ASP | ILE | SER | ASP | THR | ILE | ||||
| 4 | TYR | PRO | ARG | ASN | PRO | ALA | MET | TYR | SER | GLU | ||||
| 5 | GLU | ALA | ARG | LEU | LYS | SER | PHE | GLN | ASN | TRP | ||||
| 6 | PRO | ASP | TYR | ALA | HIS | LEU | THR | PRO | ARG | GLU | ||||
| 7 | LEU | ALA | SER | ALA | GLY | LEU | TYR | TYR | THR | GLY | ||||
| 8 | ILE | GLY | ASP | GLN | VAL | GLN | CYS | PHE | ALA | CYS | ||||
| 9 | GLY | GLY | LYS | LEU | LYS | ASN | TRP | GLU | PRO | GLY | ||||
| 10 | ASP | ARG | ALA | TRP | SER | GLU | HIS | ARG | ARG | HIS | ||||
| 11 | PHE | PRO | ASN | CYS | PHE | PHE | VAL | LEU | GLY | ARG | ||||
| 12 | ASN | LEU | ASN | ILE | ARG | SER | GLU |
Samples:
sample_1: Xiap-BIR2, [U-100% 13C; U-100% 15N], 240 uM
sample_conditions_1: ionic strength: 0.15 M; pH: 7; pressure: 1 atm; temperature: 293.15 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 3D BEST TROSY HNCA | sample_1 | isotropic | sample_conditions_1 |
| 3D BEST TROSY HNCACB | sample_1 | isotropic | sample_conditions_1 |
| 3D BEST TROSY HNCOCACB | sample_1 | isotropic | sample_conditions_1 |
| 3D BEST TROSY HNCO | sample_1 | isotropic | sample_conditions_1 |
| 3D BEST TROSY HNCOCA | sample_1 | isotropic | sample_conditions_1 |
| 2D 1H-15N BEST TROSY | sample_1 | isotropic | sample_conditions_1 |
| 3D 15N-separated NOESY | sample_1 | isotropic | sample_conditions_1 |
Software:
CcpNMR v3.0.4 - chemical shift assignment
NMR spectrometers:
- Bruker AVANCE III 950 MHz
Download HSQC peak lists in one of the following formats:
CSV: Backbone
or all simulated shifts
SPARKY: Backbone
or all simulated shifts