BMRB Entry 51890
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR51890
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Title: Assignment of human Dynein Light intermediate chain 2 (LIC2) PubMed: 37476506
Deposition date: 2023-03-29 Original release date: 2023-07-28
Authors: Henen, Morkos; Vogeli, Beat
Citation: Henen, Morkos; Paukovich, Natasia; Prekeris, Rytis; Vogeli, Beat. "Solution NMR Backbone Assignment of the C-Terminal Region of Human Dynein Light Intermediate Chain 2 (LIC2-C) Unveils Structural Resemblance with Its Homologue LIC1-C" Magnetochemistry 9, 166-166 (2023).
Assembly members:
entity_1, polymer, 132 residues, Formula weight is not available
Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens
Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pGEX-6p-1
Entity Sequences (FASTA):
entity_1: GPWATPTRASESPARGPSGS
PRTQGRGGPASVPSSSPGTS
VKKPDPNIKNNAASEGVLAS
FFNSLLSKKTGSPGSPGAGG
VQSTAKKSGQKTVLSNVQEE
LDRMTRKPDSMVTNSSTENE
AGSGSGHHHHHH
- assigned_chemical_shifts
Data type | Count |
13C chemical shifts | 189 |
15N chemical shifts | 101 |
1H chemical shifts | 101 |
Additional metadata:
Assembly:
Entity Assembly ID | Entity Name | Entity ID |
---|---|---|
1 | LIC2 | 1 |
Entities:
Entity 1, LIC2 132 residues - Formula weight is not available
1 | GLY | PRO | TRP | ALA | THR | PRO | THR | ARG | ALA | SER | ||||
2 | GLU | SER | PRO | ALA | ARG | GLY | PRO | SER | GLY | SER | ||||
3 | PRO | ARG | THR | GLN | GLY | ARG | GLY | GLY | PRO | ALA | ||||
4 | SER | VAL | PRO | SER | SER | SER | PRO | GLY | THR | SER | ||||
5 | VAL | LYS | LYS | PRO | ASP | PRO | ASN | ILE | LYS | ASN | ||||
6 | ASN | ALA | ALA | SER | GLU | GLY | VAL | LEU | ALA | SER | ||||
7 | PHE | PHE | ASN | SER | LEU | LEU | SER | LYS | LYS | THR | ||||
8 | GLY | SER | PRO | GLY | SER | PRO | GLY | ALA | GLY | GLY | ||||
9 | VAL | GLN | SER | THR | ALA | LYS | LYS | SER | GLY | GLN | ||||
10 | LYS | THR | VAL | LEU | SER | ASN | VAL | GLN | GLU | GLU | ||||
11 | LEU | ASP | ARG | MET | THR | ARG | LYS | PRO | ASP | SER | ||||
12 | MET | VAL | THR | ASN | SER | SER | THR | GLU | ASN | GLU | ||||
13 | ALA | GLY | SER | GLY | SER | GLY | HIS | HIS | HIS | HIS | ||||
14 | HIS | HIS |
Samples:
sample_1: LIC2, [U-100% 13C; U-100% 15N], 840 uM; NaCl 150 mM
sample_conditions_1: ionic strength: 150 mM; pH: 6.5; pressure: 1 atm; temperature: 298 K
Experiments:
Name | Sample | Sample state | Sample conditions |
---|---|---|---|
2D 1H-15N HSQC | sample_1 | isotropic | sample_conditions_1 |
3D HNCACB | sample_1 | isotropic | sample_conditions_1 |
3D CBCACONH | sample_1 | isotropic | sample_conditions_1 |
3D HNN | sample_1 | isotropic | sample_conditions_1 |
Software:
CcpNMR - chemical shift assignment, data analysis
TOPSPIN - collection
NMRFAM-SPARKY - data analysis
NMRPipe - processing
NMR spectrometers:
- Bruker AVANCE NEO 600 MHz
Download HSQC peak lists in one of the following formats:
CSV: Backbone
or all simulated shifts
SPARKY: Backbone
or all simulated shifts