BMRB Entry 52218
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR52218
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NMR-STAR v3 text file.
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Citation: Sterbova, Petra; Wang, Chun-Hsiung; Carillo, Kathleen; Lou, Yuan-Chao; Kato, Takayuki; Namba, Keiichi; Tzou, Der-Lii; Chang, Wei-Hau. "Molecular Mechanism of pH-Induced Protrusion Configuration Switching in Piscine Betanodavirus Implies a Novel Antiviral Strategy" ACS Infect. Dis. 10, 3304-3319 (2024).
PubMed: 39087906
Assembly members:
entity_1, polymer, 125 residues, 13809.3 Da.
Natural source: Common Name: Dragon grouper nervous necrosis virus Taxonomy ID: 292633 Superkingdom: Viruses Kingdom: not available Genus/species: Betanodavirus Redspotted grouper nervous necrosis virus
Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pETDuet
Entity Sequences (FASTA):
entity_1: TPEETTAPIMTQGSLYNDSL
STNDFKSILLGSTPLDIAPD
GAVFQLDRPLSIDYSLGTGD
VDRAVYWHLKKFAGNAGTPA
GWFRWGIWDNFNKTFTDGVA
YYSDEQPRQILLPVGTVCTR
VDSEN
- assigned_chemical_shifts
| Data type | Count |
| 13C chemical shifts | 376 |
| 15N chemical shifts | 120 |
| 1H chemical shifts | 120 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | protrusion domain, chain 1 | 1 |
| 2 | protrusion domain, chain 2 | 1 |
| 3 | protrusion domain, chain 3 | 1 |
Entities:
Entity 1, protrusion domain, chain 1 125 residues - 13809.3 Da.
| 1 | THR | PRO | GLU | GLU | THR | THR | ALA | PRO | ILE | MET | ||||
| 2 | THR | GLN | GLY | SER | LEU | TYR | ASN | ASP | SER | LEU | ||||
| 3 | SER | THR | ASN | ASP | PHE | LYS | SER | ILE | LEU | LEU | ||||
| 4 | GLY | SER | THR | PRO | LEU | ASP | ILE | ALA | PRO | ASP | ||||
| 5 | GLY | ALA | VAL | PHE | GLN | LEU | ASP | ARG | PRO | LEU | ||||
| 6 | SER | ILE | ASP | TYR | SER | LEU | GLY | THR | GLY | ASP | ||||
| 7 | VAL | ASP | ARG | ALA | VAL | TYR | TRP | HIS | LEU | LYS | ||||
| 8 | LYS | PHE | ALA | GLY | ASN | ALA | GLY | THR | PRO | ALA | ||||
| 9 | GLY | TRP | PHE | ARG | TRP | GLY | ILE | TRP | ASP | ASN | ||||
| 10 | PHE | ASN | LYS | THR | PHE | THR | ASP | GLY | VAL | ALA | ||||
| 11 | TYR | TYR | SER | ASP | GLU | GLN | PRO | ARG | GLN | ILE | ||||
| 12 | LEU | LEU | PRO | VAL | GLY | THR | VAL | CYS | THR | ARG | ||||
| 13 | VAL | ASP | SER | GLU | ASN |
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