BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 5235

Title: Resonance assignment and secondary structure determination of a C-terminal fragment of the Lupus Autoantigen (La) protein containing a putative RNA recognition motif (RRM)   PubMed: 12018493

Deposition date: 2001-12-17 Original release date: 2002-08-22

Authors: Jacks, Amanda; Kelly, Geoff; Curry, Stephen; Conte, Maria

Citation: Jacks, Amanda; Kelly, Geoff; Curry, Stephen; Conte, Maria. "Letter to the Editor: Resonance assignment and secondary structure determination of a C-terminal fragment of the Lupus Autoantigen (La) protein containing a putative RNA recognition motif (RRM)"  J. Biomol. NMR 22, 387-388 (2002).

Assembly members:
Lupus autoantigen protein, polymer, 121 residues, Formula weight is not available

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):
Lupus autoantigen protein: MRSGHHHHHHGSLEEKIGCL LKFSGDLDDQTCREDLHILF SNHGEIKWIDFVRGAKEGII LFKEKAKEALGKAKDANNGN LQLRNKEVTWEVLEGEVEKE ALKKIIEDQQESLNKWKSKG R

Data sets:
Data typeCount
1H chemical shifts747
13C chemical shifts453
15N chemical shifts111

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1La C-terminal(225-334)1

Entities:

Entity 1, La C-terminal(225-334) 121 residues - Formula weight is not available

1   METARGSERGLYHISHISHISHISHISHIS
2   GLYSERLEUGLUGLULYSILEGLYCYSLEU
3   LEULYSPHESERGLYASPLEUASPASPGLN
4   THRCYSARGGLUASPLEUHISILELEUPHE
5   SERASNHISGLYGLUILELYSTRPILEASP
6   PHEVALARGGLYALALYSGLUGLYILEILE
7   LEUPHELYSGLULYSALALYSGLUALALEU
8   GLYLYSALALYSASPALAASNASNGLYASN
9   LEUGLNLEUARGASNLYSGLUVALTHRTRP
10   GLUVALLEUGLUGLYGLUVALGLULYSGLU
11   ALALEULYSLYSILEILEGLUASPGLNGLN
12   GLUSERLEUASNLYSTRPLYSSERLYSGLY
13   ARG

Samples:

sample_1: Lupus autoantigen protein, [U-95% 13C; U-93% 15N], 1.0 mM

Ex-cond_1: pH: 7.0; temperature: 300 K

Experiments:

NameSampleSample stateSample conditions

Software:

No software information available

NMR spectrometers:

  • Varian INOVA 600 MHz
  • Varian INOVA 800 MHz

Related Database Links:

BMRB 17878
PDB
DBJ BAE87871 BAE87890 BAG70042 BAG70165 BAI45822
EMBL CAA31985 CAA32815
GB AAA36577 AAA51885 AAH01289 AAH20818 AAP88864
REF NP_001267347 NP_001270975 NP_001281074 NP_003133 XP_001497943
SP P05455
AlphaFold P05455

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated shifts
SPARKY: Backbone or all simulated shifts