BMRB Entry 52445

Name: SARS-CoV-2 Fusion Domain
Published: 2024-07-19

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR52445

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

SARS-CoV-2 Fusion Domain

Deposition date:

2024-05-07

Original release date:

2024-07-19

Authors:

Birtles, Daniel; Lee, Jinwoo

Citation:

Citation: Birtles, Daniel; Guiyab, Lijon; Abbas, Wafa; Lee, Jinwoo. "Positive residues of the SARS-CoV-2 fusion domain are key contributors to the initiation of membrane fusion" J. Biol. Chem. 300, 107564-107564 (2024).
PubMed: 39002677

Assembly members:

Assembly members:
entity_1, polymer, 40 residues, 4424.11 Da.

Natural source:

Natural source: Common Name: SARS-CoV-2 Taxonomy ID: 2697049 Superkingdom: Viruses Kingdom: not available Genus/species: Betacoronavirus HCoV-SARS

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET41

Entity Sequences (FASTA):

Entity Sequences (FASTA):
entity_1: SFIEDLLFNKVTLADAGFIK QYGDCLGDIAARDLICAQKF

Data sets:

assigned_chemical_shifts

Data type	Count
19F chemical shifts	16

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	SARS-CoV-2 Fusion Domain	1

Entities:

Entity 1, SARS-CoV-2 Fusion Domain 40 residues - 4424.11 Da.

1	SER	PFF	ILE	GLU	ASP	LEU	LEU	PFF	ASN	LYS
2	VAL	THR	LEU	ALA	ASP	ALA	GLY	PFF	ILE	LYS
3	GLN	TYR	GLY	ASP	CYS	LEU	GLY	ASP	ILE	ALA
4	ALA	ARG	ASP	LEU	ILE	CYS	ALA	GLN	LYS	PFF

Name	Sample	Sample state	Sample conditions
1H 19F	sample_1	isotropic	sample_conditions_1
1H 19F	sample_1	isotropic	sample_conditions_2
1H 19F	sample_1	isotropic	sample_conditions_3
1H 19F	sample_1	isotropic	sample_conditions_4

BMRB Entry 52445

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

1	SER	PFF	ILE	GLU	ASP	LEU	LEU	PFF	ASN	LYS
2	VAL	THR	LEU	ALA	ASP	ALA	GLY	PFF	ILE	LYS
3	GLN	TYR	GLY	ASP	CYS	LEU	GLY	ASP	ILE	ALA
4	ALA	ARG	ASP	LEU	ILE	CYS	ALA	GLN	LYS	PFF

1	SER	PFF	ILE	GLU	ASP	LEU	LEU	PFF	ASN	LYS
2	VAL	THR	LEU	ALA	ASP	ALA	GLY	PFF	ILE	LYS
3	GLN	TYR	GLY	ASP	CYS	LEU	GLY	ASP	ILE	ALA
4	ALA	ARG	ASP	LEU	ILE	CYS	ALA	GLN	LYS	PFF

1	SER	PFF	ILE	GLU	ASP	LEU	LEU	PFF	ASN	LYS
2	VAL	THR	LEU	ALA	ASP	ALA	GLY	PFF	ILE	LYS
3	GLN	TYR	GLY	ASP	CYS	LEU	GLY	ASP	ILE	ALA
4	ALA	ARG	ASP	LEU	ILE	CYS	ALA	GLN	LYS	PFF