BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 5362

Title: 1H, 15N and 13C Backbone resonance assignments of the 40 kDa LicT-CAT-PRD1 protein

Deposition date: 2002-05-03 Original release date: 2002-09-25

Authors: Ducat, Thierry; Declerck, Nathalie; Kochoyan, Michel; Demene, Helene

Citation: Ducat, Thierry; Declerck, Nathalie; Kochoyan, Michel; Demene, Helene. "Letter to the Editor: 1H, 15N and 13C Backbone resonance assignments of the 40 kDa LicT-CAT-PRD1 protein"  J. Biomol. NMR 23, 325-326 (2002).

Assembly members:
LicT CAT-PRD1, polymer, 175 residues, 19925.9 Da.

Natural source:   Common Name: B. subtilis   Taxonomy ID: 1423   Superkingdom: Eubacteria   Kingdom: not available   Genus/species: Bacillus subtilis

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: pET15 derivative

Entity Sequences (FASTA):
LicT CAT-PRD1: MKIAKVINNNVISVVNEQGK ELVVMGRGLAFQKKSGDDVD EARIEKVFTLDNKDVSEKFK TLLYDIPIECMEVSEEIISY AKLQLGKKLNDSIYVSLTDH INFAIQRNQKGLDIKNALLW ETKRLYKDEFAIGKEALVMV KNKTGVSLPEDEAGFIALHI VNAELNELQHHHHHH

Data sets:
Data typeCount
1H chemical shifts161
13C chemical shifts481
15N chemical shifts161

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1CAT-PRD1 subunit 11
2CAT-PRD1 subunit 21

Entities:

Entity 1, CAT-PRD1 subunit 1 175 residues - 19925.9 Da.

1   METLYSILEALALYSVALILEASNASNASN
2   VALILESERVALVALASNGLUGLNGLYLYS
3   GLULEUVALVALMETGLYARGGLYLEUALA
4   PHEGLNLYSLYSSERGLYASPASPVALASP
5   GLUALAARGILEGLULYSVALPHETHRLEU
6   ASPASNLYSASPVALSERGLULYSPHELYS
7   THRLEULEUTYRASPILEPROILEGLUCYS
8   METGLUVALSERGLUGLUILEILESERTYR
9   ALALYSLEUGLNLEUGLYLYSLYSLEUASN
10   ASPSERILETYRVALSERLEUTHRASPHIS
11   ILEASNPHEALAILEGLNARGASNGLNLYS
12   GLYLEUASPILELYSASNALALEULEUTRP
13   GLUTHRLYSARGLEUTYRLYSASPGLUPHE
14   ALAILEGLYLYSGLUALALEUVALMETVAL
15   LYSASNLYSTHRGLYVALSERLEUPROGLU
16   ASPGLUALAGLYPHEILEALALEUHISILE
17   VALASNALAGLULEUASNGLULEUGLNHIS
18   HISHISHISHISHIS

Samples:

sample_1: LicT CAT-PRD1, [U-15N; U-13C; U-2H], 1.0 mM; Na Phosphate Buffer 10 mM; Na2SO4 50 mM; DTT 2 mM; EDTA 0.1 mM; Benzmidine 0.1 mM; H2O 90%; D2O 10%

condition_1: pH: 6.4 na; temperature: 293 K; ionic strength: 0.15 M

Experiments:

NameSampleSample stateSample conditions
1H-15N TROSY-HSQCnot availablenot availablenot available
TROSY-HNCAnot availablenot availablenot available
TROSY-HN(CO)CAnot availablenot availablenot available
TROSY-HNCACBnot availablenot availablenot available
TROSY-HN(CO)CACBnot availablenot availablenot available
TROSY-HNCOnot availablenot availablenot available
TROSY-HN(CA)COnot availablenot availablenot available
15N edited-NOESYnot availablenot availablenot available

Software:

Gifa v4.4 - processing

NMRView v5.0 - assignment

NMR spectrometers:

  • Bruker DMX 600 MHz
  • Bruker DRX 500 MHz
  • Bruker DMX 800 MHz
  • Varian INOVA 800 MHz

Related Database Links:

PDB
DBJ BAA11696 BAI87589 BAM55992 BAM60004 GAK81310
EMBL CAA82194 CAB15944 CCF07176 CCU57030 CEI59719
GB ADM39914 ADV94733 AEP88876 AEP92976 AFI30559
REF NP_391787 WP_003218864 WP_003236231 WP_003242598 WP_014115714
SP P39805
AlphaFold P39805

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated shifts
SPARKY: Backbone or all simulated shifts