BMRB Entry 5590
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR5590
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Title: 1H, 13C and 15N resonance assignments of rice telomere binding domain from Oryza sativa PubMed: 12878845
Deposition date: 2002-11-15 Original release date: 2003-11-24
Authors: Ko, Sung-gun
Citation: Ko, Sung-gun; Shin, Joon; Yu, Eun; Chung, In; Tanaka, Toshiyuki; Lee, Weontae. "Letter to the Editor: 1H, 13C and 15N Resonance Assignments of Rice Telomere Binding Domain from Oryza sativa" J. Biomol. NMR 27, 89-90 (2003).
Assembly members:
Telomere binding protein-1, polymer, 120 residues, 13729.68 Da.
Natural source: Common Name: Rice Taxonomy ID: 4530 Superkingdom: Eukaryota Kingdom: Viridiplantae Genus/species: Oryza sativa
Experimental source: Production method: recombinant technology
Entity Sequences (FASTA):
Telomere binding protein-1: FPFADPNSLALANVPLSRSK
RPDFGQRRIRRPFTVAEVEL
LVEAVEHLGTGRWRDVKFRA
FENVHHRTYVDLKDKWKTLV
HTASIAPQQRRGAPVPQELL
DRVLAAQAYWSVDSSGRIVT
- assigned_chemical_shifts
Data type | Count |
13C chemical shifts | 425 |
15N chemical shifts | 115 |
1H chemical shifts | 527 |
Additional metadata:
Assembly:
Entity Assembly ID | Entity Name | Entity ID |
---|---|---|
1 | DNA-binding domain in RTBP1 | 1 |
Entities:
Entity 1, DNA-binding domain in RTBP1 120 residues - 13729.68 Da.
1 | PHE | PRO | PHE | ALA | ASP | PRO | ASN | SER | LEU | ALA | |
2 | LEU | ALA | ASN | VAL | PRO | LEU | SER | ARG | SER | LYS | |
3 | ARG | PRO | ASP | PHE | GLY | GLN | ARG | ARG | ILE | ARG | |
4 | ARG | PRO | PHE | THR | VAL | ALA | GLU | VAL | GLU | LEU | |
5 | LEU | VAL | GLU | ALA | VAL | GLU | HIS | LEU | GLY | THR | |
6 | GLY | ARG | TRP | ARG | ASP | VAL | LYS | PHE | ARG | ALA | |
7 | PHE | GLU | ASN | VAL | HIS | HIS | ARG | THR | TYR | VAL | |
8 | ASP | LEU | LYS | ASP | LYS | TRP | LYS | THR | LEU | VAL | |
9 | HIS | THR | ALA | SER | ILE | ALA | PRO | GLN | GLN | ARG | |
10 | ARG | GLY | ALA | PRO | VAL | PRO | GLN | GLU | LEU | LEU | |
11 | ASP | ARG | VAL | LEU | ALA | ALA | GLN | ALA | TYR | TRP | |
12 | SER | VAL | ASP | SER | SER | GLY | ARG | ILE | VAL | THR |
Samples:
sample_1: Telomere binding protein-1, [U-100% 15N], 1 mM
sample_2: Telomere binding protein-1, [U-100% 13C; U-100% 15N], 1 mM
Ex-cond_1: pH: 7.0; temperature: 303 K
Experiments:
Name | Sample | Sample state | Sample conditions |
---|---|---|---|
15N-NOESY HSQC | not available | not available | not available |
HNCA | not available | not available | not available |
HNCACB | not available | not available | not available |
CBCACONH | not available | not available | not available |
HNCO | not available | not available | not available |
15N-edited NOESY | not available | not available | not available |
15N-edited TOCSY | not available | not available | not available |
13C-edited NOESY | not available | not available | not available |
HCCH-TOCSY | not available | not available | not available |
Software:
SPARKY v2.0 -
NMR spectrometers:
- Bruker DRX 500 MHz
- Bruker DRX 800 MHz
- Varian INOVA 500 MHz
Download HSQC peak lists in one of the following formats:
CSV: Backbone
or all simulated shifts
SPARKY: Backbone
or all simulated shifts