BMRB Entry 6552
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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR6552
MolProbity Validation Chart
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NMR-STAR v3 text file.
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Title: A Protein Folding Pathway with Multiple Folding Intermediates at Atomic Resolution PubMed: 15793003
Deposition date: 2005-03-18 Original release date: 2005-08-30
Authors: Feng, H.; Zhou, Z.; Bai, Y.
Citation: Feng, H.; Zhou, Z.; Bai, Y.. "A protein folding pathway with multiple folding intermediates at atomic resolution" Proc. Natl. Acad. Sci. U. S. A. 102, 5026-5031 (2005).
Assembly members:
redesigned apo-cytochrome b562, polymer, 106 residues, Formula weight is not available
Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homon sapiens
Experimental source: Production method: recombinant technology
Entity Sequences (FASTA):
redesigned apo-cytochrome b562: ADLEDNDETGNDNGKGGEKA
DNAAQVKDALTKMRAAALDA
QKATPPKLEDKSPDSPEMKD
FRHGFDILVGQIDDALKLAN
EGKVKEAQAAAEQLKTTGRA
GNQKGG
- assigned_chemical_shifts
- coupling_constants
| Data type | Count |
| 13C chemical shifts | 311 |
| 15N chemical shifts | 116 |
| 1H chemical shifts | 686 |
| coupling constants | 100 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | redesigned apo-cytochrome b562 | 1 |
Entities:
Entity 1, redesigned apo-cytochrome b562 106 residues - Formula weight is not available
| 1 | ALA | ASP | LEU | GLU | ASP | ASN | ASP | GLU | THR | GLY | ||||
| 2 | ASN | ASP | ASN | GLY | LYS | GLY | GLY | GLU | LYS | ALA | ||||
| 3 | ASP | ASN | ALA | ALA | GLN | VAL | LYS | ASP | ALA | LEU | ||||
| 4 | THR | LYS | MET | ARG | ALA | ALA | ALA | LEU | ASP | ALA | ||||
| 5 | GLN | LYS | ALA | THR | PRO | PRO | LYS | LEU | GLU | ASP | ||||
| 6 | LYS | SER | PRO | ASP | SER | PRO | GLU | MET | LYS | ASP | ||||
| 7 | PHE | ARG | HIS | GLY | PHE | ASP | ILE | LEU | VAL | GLY | ||||
| 8 | GLN | ILE | ASP | ASP | ALA | LEU | LYS | LEU | ALA | ASN | ||||
| 9 | GLU | GLY | LYS | VAL | LYS | GLU | ALA | GLN | ALA | ALA | ||||
| 10 | ALA | GLU | GLN | LEU | LYS | THR | THR | GLY | ARG | ALA | ||||
| 11 | GLY | ASN | GLN | LYS | GLY | GLY |
Samples:
sample_1: redesigned apo-cytochrome b562 mM; sodium acetate 50 mM; H2O 92.5%; D2O 7.5%
sample_2: redesigned apo-cytochrome b562 mM; sodium acetate 50 mM; D2O 99%
sample_cond_1: pH: 4.84; pressure: 1 atm; temperature: 298 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 2D HSQC | not available | not available | not available |
| 3D 15N-separated NOESY | not available | not available | not available |
| 3D 13C-separated NOESY | not available | not available | not available |
| HNHA | not available | not available | not available |
| 3D HNCACB | not available | not available | not available |
| 3D CBCACONH | not available | not available | not available |
| 3D HAHBCONH | not available | not available | not available |
| 3D HNCO | not available | not available | not available |
| 2DNOESY | not available | not available | not available |
| 2D NOESY | not available | not available | not available |
Software:
NMRPipe v5.0.4 - processing
X-PLOR vNIH-2.9 - refinement, structure solution
NMR spectrometers:
- Bruker DRX 500 MHz
Download HSQC peak lists in one of the following formats:
CSV: Backbone
or all simulated shifts
SPARKY: Backbone
or all simulated shifts