BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 6618

Title: 1H chemical shift assignments for peptide P6   PubMed: 16460023

Deposition date: 2005-05-03 Original release date: 2006-08-07

Authors: Martins, Rafael; Sforca, Mauricio; Amino, Rogerio; Juliano, Maria; Juliano, Luiz; Pertinhez, Thelma; Spisni, Alberto; Schenkman, Sergio

Citation: Martins, Rafael; Sforca, Mauricio; Amino, Rogerio; Juliano, Maria; Oyama, Sergio; Juliano, Luiz; Pertinhez, Thelma; Spisni, Alberto; Schenkman, Sergio. "Lytic Activity and Structural Differences of Amphipathic Peptides Derived from Trialysin"  Biochemistry 45, 1765-1774 (2006).

Assembly members:
P6, polymer, 32 residues, 3510.4 Da.

Natural source:   Common Name: Triatoma infestans   Taxonomy ID: 30076   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Triatoma infestans

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):
P6: FKIKPGKVLDKFGKIVGKVL KQLKKVSAVAKV

Data sets:
Data typeCount
1H chemical shifts201

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1peptide P61

Entities:

Entity 1, peptide P6 32 residues - 3510.4 Da.

1   PHELYSILELYSPROGLYLYSVALLEUASP
2   LYSPHEGLYLYSILEVALGLYLYSVALLEU
3   LYSGLNLEULYSLYSVALSERALAVALALA
4   LYSVAL

Samples:

sample_1: P6 1.2 mM; TFE 30 % (vol); D2O 5 % (vol); H2O 65 % (vol)

P6_conditions: pH: 4; temperature: 310 K

Experiments:

NameSampleSample stateSample conditions
1H TOCSYsample_1not availableP6_conditions
1H COSYsample_1not availableP6_conditions
1H NOESYsample_1not availableP6_conditions
1H ROESYsample_1not availableP6_conditions

Software:

NMRView5 v5, One Moon Scientific Inc. - chemical shift assignment, spectrum analysis

NMR spectrometers:

  • Varian Unity 500 MHz

Related Database Links:

BMRB 6616 6619
GB AAL82380 ABR27919 ABR27943