BMRB Entry 6865
Click here to enlarge.
PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR6865
MolProbity Validation Chart
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry
Title: 1H, 13C, and 15N chemical shift assignments for P. falciparum TRAP-TSR domain PubMed: 16815922
Deposition date: 2005-10-18 Original release date: 2006-08-07
Authors: Tossavainen, Helena; Permi, Perttu; Kilpelainen, Ilkka
Citation: Tossavainen, Helena; Pihlajamaa, Tero; Huttunen, Toni; Raulo, Erkki; Rauvala, Heikki; Permi, Perttu; Kilpelainen, Ilkka. "The layered fold of the TSR domain of P. falciparum TRAP contains a heparin binding site" Protein Sci. 15, 1760-1768 (2006).
Assembly members:
TRAP-TSR domain, polymer, 49 residues, Formula weight is not available
Natural source: Common Name: Plasmodium falciparum Taxonomy ID: 5833 Superkingdom: Eukaryota Kingdom: not available Genus/species: Plasmodium falciparum
Experimental source: Production method: recombinant technology
Entity Sequences (FASTA):
TRAP-TSR domain: GSASCGVWDEWSPCSVTCGK
GTRSRKREILHEGCTSEIQE
QCEEERCPP
- assigned_chemical_shifts
| Data type | Count |
| 13C chemical shifts | 150 |
| 15N chemical shifts | 51 |
| 1H chemical shifts | 304 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | TRAP-TSR domain | 1 |
Entities:
Entity 1, TRAP-TSR domain 49 residues - Formula weight is not available
| 1 | GLY | SER | ALA | SER | CYS | GLY | VAL | TRP | ASP | GLU | ||||
| 2 | TRP | SER | PRO | CYS | SER | VAL | THR | CYS | GLY | LYS | ||||
| 3 | GLY | THR | ARG | SER | ARG | LYS | ARG | GLU | ILE | LEU | ||||
| 4 | HIS | GLU | GLY | CYS | THR | SER | GLU | ILE | GLN | GLU | ||||
| 5 | GLN | CYS | GLU | GLU | GLU | ARG | CYS | PRO | PRO |
Samples:
sample_1: TRAP-TSR domain, [U-13C; U-15N], 0.5 mM
conditions_1: pH: 6.6; temperature: 283 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| HNCACB | sample_1 | not available | conditions_1 |
| CBCA(CO)NH | sample_1 | not available | conditions_1 |
| HNCO | sample_1 | not available | conditions_1 |
| CC(CO)NH | sample_1 | not available | conditions_1 |
| HCCH-COSY | sample_1 | not available | conditions_1 |
| 1H-15N-HSQC | sample_1 | not available | conditions_1 |
| 1H-13C-HSQC | sample_1 | not available | conditions_1 |
Software:
SPARKY v3.106 - assignment
NMR spectrometers:
- Varian Inova 600 MHz
- Varian Inova 800 MHz
Related Database Links:
| BMRB | 16456 |
| PDB | |
| DBJ | BAA31173 BAA31174 BAA31178 BAA31191 BAA31192 |
| EMBL | CAA31440 CAE46497 |
| GB | AAA29774 AAC18657 AAW78130 AAW78131 AAW78136 |
| PRF | 1411304A 1708291A |
| SP | P16893 |
| AlphaFold | P16893 |
Download HSQC peak lists in one of the following formats:
CSV: Backbone
or all simulated shifts
SPARKY: Backbone
or all simulated shifts