BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 6950

Title: domain 3 of RAP   PubMed: 17016671

Deposition date: 2006-01-24 Original release date: 2007-02-13

Authors: Lee, Donghan; Walsh, Joseph; Mikhailenko, Irina; Migliorini, Molly; Yu, Ping; Wu, Yibing; Locket, Stephen; Strickland, Dudley; Wang, Yun-Xing

Citation: Lee, Donghan; Walsh, Joseph; Yu, Ping; Migliorini, Molly; Wu, Yibing; Strickland, Dudley; Wang, Yun-Xing. "NMR assignment of domain 3 of the receptor-associated protein (RAP)"  J. Biomol. NMR 36, 56-56 (2006).

Assembly members:
domain 3 of RAP, polymer, 118 residues, Formula weight is not available

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):
domain 3 of RAP: RVSHQGYSTEAEFEEPRVID LWDLAQSANLTDKELEAFRE ELKHFEAKIEKHNHYQKQLE IAHEKLRHAESVGDGERVSR SREKHALLEGRTKELGYTVK KHLQDLSGRISRARHNEL

Data sets:
Data typeCount
13C chemical shifts487
15N chemical shifts119
1H chemical shifts783

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1domain 3 of RAP1

Entities:

Entity 1, domain 3 of RAP 118 residues - Formula weight is not available

1   ARGVALSERHISGLNGLYTYRSERTHRGLU
2   ALAGLUPHEGLUGLUPROARGVALILEASP
3   LEUTRPASPLEUALAGLNSERALAASNLEU
4   THRASPLYSGLULEUGLUALAPHEARGGLU
5   GLULEULYSHISPHEGLUALALYSILEGLU
6   LYSHISASNHISTYRGLNLYSGLNLEUGLU
7   ILEALAHISGLULYSLEUARGHISALAGLU
8   SERVALGLYASPGLYGLUARGVALSERARG
9   SERARGGLULYSHISALALEULEUGLUGLY
10   ARGTHRLYSGLULEUGLYTYRTHRVALLYS
11   LYSHISLEUGLNASPLEUSERGLYARGILE
12   SERARGALAARGHISASNGLULEU

Samples:

sample_1: domain 3 of RAP, [U-13C; U-15N], 1.0 mM

conditions_1: pH: 7.25; temperature: 303 K

Experiments:

NameSampleSample stateSample conditions
15N-HSQCsample_1not availableconditions_1
13C-HSQCsample_1not availableconditions_1
3D HNCAsample_1not availableconditions_1
3D HNCACBsample_1not availableconditions_1
15N-resolved NOESYsample_1not availableconditions_1
13C-resolved NOESYs for aliphatic and aromatic carbonssample_1not availableconditions_1
3D HCCH-TOCSYsample_1not availableconditions_1

Software:

No software information available

NMR spectrometers:

  • Varian Inova 800 MHz

Related Database Links:

BMRB 16454
PDB
DBJ BAD96224 BAD96247 BAE87201 BAF85010 BAG35576
EMBL CAH90295
GB AAA51553 AAC67373 AAI05075 AAI12068 AAY18903
REF NP_001125136 NP_001233320 NP_002328 XP_001085674 XP_003279069
SP P30533
AlphaFold P30533

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated shifts
SPARKY: Backbone or all simulated shifts