BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 7278

Title: Backbone amide chemical shifts for iG80b E. coli RNase H   PubMed: 17088323

Deposition date: 2006-08-28 Original release date: 2007-10-09

Authors: Butterwick, Joel; Palmer, Arthur

Citation: Butterwick, Joel; Palmer, Arthur. "An inserted Gly residue fine tunes dynamics between mesophilc and thermophilic ribonucleases H"  Protein Sci. 15, 2697-2707 (2006).

Assembly members:
iG80b ecRNH, polymer, 156 residues, Formula weight is not available

Natural source:   Common Name: E. coli   Taxonomy ID: 562   Superkingdom: Eubacteria   Kingdom: Protista   Genus/species: Escherichia coli

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):
iG80b ecRNH: MLKQVEIFTDGSCLGNPGPG GYGAILRYRGREKTFSAGYT RTTNNRMELMAAIVALEALK EHCEVILSTDSQYVRQGITQ GWIHNWKKRGWKTADKKPVK NVDLWQRLDAALGQHQIKWE WVKGHAGHPENERCDELARA AAMNPTLEDTGYQVEV

Data sets:
Data typeCount
15N chemical shifts67
1H chemical shifts67

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1iG80b ecRNH1

Entities:

Entity 1, iG80b ecRNH 156 residues - Formula weight is not available

1   METLEULYSGLNVALGLUILEPHETHRASP
2   GLYSERCYSLEUGLYASNPROGLYPROGLY
3   GLYTYRGLYALAILELEUARGTYRARGGLY
4   ARGGLULYSTHRPHESERALAGLYTYRTHR
5   ARGTHRTHRASNASNARGMETGLULEUMET
6   ALAALAILEVALALALEUGLUALALEULYS
7   GLUHISCYSGLUVALILELEUSERTHRASP
8   SERGLNTYRVALARGGLNGLYILETHRGLN
9   GLYTRPILEHISASNTRPLYSLYSARGGLY
10   TRPLYSTHRALAASPLYSLYSPROVALLYS
11   ASNVALASPLEUTRPGLNARGLEUASPALA
12   ALALEUGLYGLNHISGLNILELYSTRPGLU
13   TRPVALLYSGLYHISALAGLYHISPROGLU
14   ASNGLUARGCYSASPGLULEUALAARGALA
15   ALAALAMETASNPROTHRLEUGLUASPTHR
16   GLYTYRGLNVALGLUVAL

Samples:

sample_1: iG80b ecRNH, [U-2H; U-15N], 1.0 ± 0.1 mM

conditions_1: ionic strength: 100 mM; pH: 5.5; temperature: 300 K

Experiments:

NameSampleSample stateSample conditions
1H-15N HSQCsample_1not availableconditions_1
HMQC-NOESY-HSQCsample_1not availableconditions_1

Software:

No software information available

NMR spectrometers:

  • Bruker AV 700 MHz

Related Database Links:

BMRB 1657 4012
PDB
DBJ BAA77885 BAB33633 BAG75734 BAI23570 BAI29084
EMBL CAA23620 CAA27660 CAP74778 CAQ30729 CAQ87812
GB AAA24565 AAB08636 AAC73319 AAG54510 AAN41862
REF NP_285902 NP_308237 NP_414750 NP_706155 NP_752197
SP A7ZHV1 A7ZWF6 B1IPU4 B1LHM3 B1XD78
AlphaFold B1IPU4 A7ZWF6 A7ZHV1 B1XD78 B1LHM3

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated shifts
SPARKY: Backbone or all simulated shifts