BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 7291

Title: NMR Assignment and Secondary Structure of Coxsackievirus and Adenovirus receptor Domain   PubMed: 17322536

Deposition date: 2006-09-07 Original release date: 2007-04-26

Authors: Jiang, Shaokai; Caffrey, Michael

Citation: Jiang, Shaokai; Caffrey, Michael. "Solution structure of the coxsackievirus and adenovirus receptor domain 2"  Protein Sci. 16, 539-542 (2007).

Assembly members:
Coxsackievirus and Adenovirus receptor, polymer, 96 residues, Formula weight is not available

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapien

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):
Coxsackievirus and Adenovirus receptor: GSSGARCYVDGSEEIGSDFK IKCEPKEGSLPLQYEWQKLS DSQKMPTSWLAEMTSSVISV KNASSEYSGTYSCTVRNRVG SDQCLLRLNVVPPSNK

Data sets:
Data typeCount
13C chemical shifts338
15N chemical shifts83
1H chemical shifts574

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1CAR-d21

Entities:

Entity 1, CAR-d2 96 residues - Formula weight is not available

1   GLYSERSERGLYALAARGCYSTYRVALASP
2   GLYSERGLUGLUILEGLYSERASPPHELYS
3   ILELYSCYSGLUPROLYSGLUGLYSERLEU
4   PROLEUGLNTYRGLUTRPGLNLYSLEUSER
5   ASPSERGLNLYSMETPROTHRSERTRPLEU
6   ALAGLUMETTHRSERSERVALILESERVAL
7   LYSASNALASERSERGLUTYRSERGLYTHR
8   TYRSERCYSTHRVALARGASNARGVALGLY
9   SERASPGLNCYSLEULEUARGLEUASNVAL
10   VALPROPROSERASNLYS

Samples:

sample_1: Coxsackievirus and Adenovirus receptor mM

cond_1: pH: 6.0; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
1H-15N HSQCnot availablenot availablenot available
HNCAnot availablenot availablenot available
HNCOCAnot availablenot availablenot available
HNCOnot availablenot availablenot available
HNCACBnot availablenot availablenot available
CBCACONHnot availablenot availablenot available
HCCH-TOCSYnot availablenot availablenot available
15N-HSQC-TOCSYnot availablenot availablenot available
15N-HSQC-NOESYnot availablenot availablenot available

Software:

NMRPipe -

NMR spectrometers:

  • Bruker DRX 600 MHz
  • Bruker Avance 800 MHz

Related Database Links:

PDB
DBJ BAG36305
EMBL CAA68868 CAH92396
GB AAC51234 AAD31772 AAF05908 AAF24344 AAG01088
REF NP_001127547 NP_001193992 NP_001193995 NP_001329 XP_001156087
SP P78310 Q5R764
AlphaFold P78310 Q5R764

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated shifts
SPARKY: Backbone or all simulated shifts