Tag category Entity_db_link
Key tags (columns):
Tags in table Entity_db_link:
| Tag | Description | data type | Mandatory |
|---|---|---|---|
| Accession_code | Accession code for the entry in the database. | line | yes |
| Author_supplied | A code indicating that the link to a related database was provided by an author (yes) or obtained through another method (no). | yes_no | |
| Chimera_segment_ID | Code indicating if the listed database link is specific to the fragment of the entity described by the tag '_Entity.Fragment'. | int | |
| Database_code | Code assigned to a database. | line | yes |
| Entity_ID | Pointer to '_Entity.ID' | int | yes |
| Entry_details | Text providing additional information about the matching entry. | text | |
| Entry_experimental_method | For structural databases the method used to determine the structure. | line | |
| Entry_ID | Pointer to '_Entry.ID' | code | yes |
| Entry_mol_code | Code assigned by the database to the molecule in the database entry. | line | |
| Entry_mol_name | Name of the molecular entity in the database entry. | line | |
| Entry_relation_type | A brief description of how the database entry is related to the molecular entity. | line | |
| Entry_structure_resolution | A value taken from the database that is a measure of the quality of the structure. | float | |
| Ordinal | An integer value used to maintain the order of the rows in the entity DB loop when reading and writing NMR-STAR files. | int | |
| Seq_align_begin | The sequence position in the database sequence at which the alignment with the sequence of the biopolymer studied begins. | code | |
| Seq_align_end | The sequence position in the database sequence at which the alignment with the sequence of the biopolymer studied. | code | |
| Seq_alignment_details | Text describing the alignment between the matched polymer sequences. | text | |
| Seq_difference_details | Text describing the differences in the sequences for the matched polymers. | text | |
| Seq_homology_expectation_val | The BLAST expectation value for the homology between the retrieved polymer and the molecular entity. | float | |
| Seq_identity | Number of residues in the retrieved sequence that have identical positions in the molecular entity determined by a homology alignment method. | float | |
| Seq_positive | Number of residues in the retrieved sequence where the corresponding residue in the molecular entity sequence has similar physical characteristics (hydrophobicity charge etc.) | float | |
| Seq_query_to_submitted_percent | In percent the ratio of the length of retrieve sequence to the length of the sequence of the molecular entity. This value can be used to determine if the retrieved sequence is a subset or superset of the molecular entity. | float | |
| Seq_subject_length | Length of the polymer sequence retrieve from the database. | int | |
| Sf_ID | Pointer to '_Entity.Sf_ID' | int | yes |