BMRB Entry 50989

Name: Proton NMR chemical shifts of GGCCTG4
Published: 2022-03-11

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR50989

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title: Proton NMR chemical shifts of GGCCTG4 PubMed: 35077744

Deposition date: 2021-06-20 Original release date: 2022-03-11

Authors: Guo, Pei

Citation: Yi, Jie; Wan, Liqi; Liu, Yuan; Lam, Sik Lok; Chan, Ho Yin Edwin; Han, Da; Guo, Pei. "NMR solution structures of d(GGCCTG) n repeats associated with spinocerebellar ataxia type 36" Int. J. Biol. Macromol. 201, 607-615 (2022).

Assembly members:
entity_1, polymer, 24 residues, Formula weight is not available

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source: Production method: chemical synthesis

Entity Sequences (FASTA):
entity_1: GGCCTGGGCCTGGGCCTGGG CCTG

Data sets:

assigned_chemical_shifts
- assigned_chemical_shifts_1

Data type	Count
1H chemical shifts	158

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	GGCCTG4	1

Entities:

Entity 1, GGCCTG4 24 residues - Formula weight is not available

1

DG

DC

DT

DG

DC

2

DT

DG

DC

DT

DG

3

DC

DT

DG

Samples:

sample_1: GGCCTG4 0.3 mM

sample_conditions_1: ionic strength: 1 mM; pH: 7; pressure: 1 atm; temperature: 303 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D 1H-1H NOESY	sample_1	isotropic	sample_conditions_1

Software:

TOPSPIN - chemical shift assignment

NMR spectrometers:

Bruker Avance 600 MHz