BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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Entry ID Data summary Entry Title Citation Title Authors
25672 Chemical Shifts: 1 set
Base-displaced intercalated structure of the N-(2'deoxyguanosin-8-yl)-3-aminobenzanthrone DNA adduct Base-Displaced Intercalated Structure of the N-(2'-Deoxyguanosin-8-yl)-3-aminobenzanthrone DNA Adduct Download bibtex for citation iamge Ashis K Basu, Chanchal K Malik, Dustin A Politica, Michael P Stone
25531 Chemical Shifts: 1 set
N2-dG-IQ modified DNA at the G1 position of the NarI recognition sequence Base-Displaced Intercalated Conformation of the 2-Amino-3-methylimidazo[4,5-f]quinoline N(2)-dG DNA Adduct Positioned at the Nonreiterated G(1) in the NarI Restriction Site Download bibtex for citation iamge Carmelo Rizzo, Edward Hawkins, Kallie Stavros, Michael Stone
19925 Chemical Shifts: 1 set
Solution NMR structure of DNA dodecamer with A:C mismatch Characterization of 5-hydroxycytosine in DNA Download bibtex for citation iamge Marta Szulik, Michael Stone, Patrick Donahue
19912 Chemical Shifts: 2 sets
Homonuclear NOE Values: 1 set
MAJOR GROOVE ORIENTATION OF THE (2S)-N6-(2-HYDROXY-3-BUTEN-1-YL)-2'-DEOXYADENOSINE DNA ADDUCT INDUCED BY 1,2-EPOXY-3-BUTENE Major Groove Orientation of the (2S)-N(6)-(2-Hydroxy-3-buten-1-yl)-2'-deoxyadenosine DNA Adduct Induced by 1,2-Epoxy-3-butene Download bibtex for citation iamge Ewa A Kowal, Michael P Stone, Michael Turo, Natalia Tretyakova, Srikanth Kotapati
19861 Chemical Shifts: 1 set
AFB1 FAPY modified AGT duplex DNA Sequence Modulates Geometrical Isomerism of the trans-8,9-Dihydro-8-(2,6-diamino-4-oxo-3,4-dihydropyrimid-5-yl-formamido)-9-hydroxy Aflatoxin B1 Adduct Download bibtex for citation iamge Kyle L Brown, Liang Li, Michael P Stone, Ruidan Ma
19863 Chemical Shifts: 1 set
AFB1 FAPY modified AG(7-deaza)G duplex DNA Sequence Modulates Geometrical Isomerism of the trans-8,9-Dihydro-8-(2,6-diamino-4-oxo-3,4-dihydropyrimid-5-yl-formamido)-9-hydroxy Aflatoxin B1 Adduct Download bibtex for citation iamge Kyle L Brown, Liang Li, Michael P Stone, Ruidan Ma
19862 Chemical Shifts: 1 set
E isomer of AFB1 FAPY modified AGC duplex DNA Sequence Modulates Geometrical Isomerism of the trans-8,9-Dihydro-8-(2,6-diamino-4-oxo-3,4-dihydropyrimid-5-yl-formamido)-9-hydroxy Aflatoxin B1 Adduct Download bibtex for citation iamge Kyle L Brown, Liang Li, Michael P Stone, Ruidan Ma
19853 Chemical Shifts: 1 set
AFB1 FAPY modified AGA duplex DNA Sequence Modulates Geometrical Isomerism of the trans-8,9-Dihydro-8-(2,6-diamino-4-oxo-3,4-dihydropyrimid-5-yl-formamido)-9-hydroxy Aflatoxin B1 Adduct Download bibtex for citation iamge Kyle L Brown, Liang Li, Michael P Stone, Ruidan Ma
19661 Chemical Shifts: 1 set
Homonuclear NOE Values: 1 set
Structure of Exocyclic S,S N6,N6-(2,3-Dihydroxy-1,4-butadiyl)-2'-Deoxyadenosine Adduct Induced by 1,2,3,4-Diepoxybutane in DNA Structures of Exocyclic R,R- and S,S-N(6),N(6)-(2,3-Dihydroxybutan-1,4-diyl)-2'-Deoxyadenosine Adducts Induced by 1,2,3,4-Diepoxybutane Download bibtex for citation iamge Ewa A Kowal, Kathleen E Doherty, Michael P Stone, Natalia Tretyakova, Susith Wickramaratne, Uthpala Seneviratne, Xiangkun Cao
19659 Chemical Shifts: 1 set
Homonuclear NOE Values: 1 set
Structure of Exocyclic R,R N6,N6-(2,3-Dihydroxy-1,4-butadiyl)-2'-Deoxyadenosine Adduct Induced by 1,2,3,4-Diepoxybutane in DNA Structures of Exocyclic R,R- and S,S-N(6),N(6)-(2,3-Dihydroxybutan-1,4-diyl)-2'-Deoxyadenosine Adducts Induced by 1,2,3,4-Diepoxybutane Download bibtex for citation iamge Ewa A Kowal, Kathleen E Doherty, Michael P Stone, Natalia Tretyakova, Susith Wickramaratne, Uthpala Seneviratne, Xiangkun Cao
19375 Chemical Shifts: 1 set
Homonuclear NOE Values: 1 set
NMR Structure of N2-IQ-dG at the G3 position in the NarI recognition sequence Base-displaced intercalation of the 2-amino-3-methylimidazo[4,5-f]quinolone N2-dG adduct in the NarI DNA recognition sequence Download bibtex for citation iamge Carmelo J Rizzo, Edward K Hawkins, Kallie M Stavros, Michael P Stone
18835 Chemical Shifts: 1 set
Homonuclear NOE Values: 1 set
Structure of perimidinone-derived synthetic nucleoside paired with guanine in DNA duplex Recognition of O6-benzyl-2'-deoxyguanosine by a perimidinone-derived synthetic nucleoside: a DNA interstrand stacking interaction. Download bibtex for citation iamge Elizabeth Dhummakupt, Ewa A Kowal, Martin Egli, Michael P Stone, Pradeep S Pallan, Rahul R Lad, Shana J Sturla, Zdzislaw Wawrzak
17885 Chemical Shifts: 1 set
Solution NMR structure of a DNA dodecamer containing the 7-aminomethyl-7-deaza-2'-deoxyguanosine adduct Site-specific stabilization of DNA by a tethered major groove amine, 7-aminomethyl-7-deaza-2'-deoxyguanosine. Download bibtex for citation iamge Barry Gold, Manjori Ganguly, Markus W Voehler, Marta W Szulik, Michael P Stone
17791 Chemical Shifts: 1 set
Structure of the duplex containing HNE derived (6S,8R,11S) gamma-HO-PdG when placed opposite dT Ring-chain tautomerization of trans-4-hydroxynonenal derived (6S,8R,11S) gamma-hydroxy-1,N2-propano-deoxyguanosine adduct when placed opposite 2'-deoxythymidine in duplex Download bibtex for citation iamge Albena Kozekova, Carmelo J Rizzo, Hai Huang, Hao Wang, Michael P Stone, R S LLoyd
17790 Chemical Shifts: 1 set
Structure of the duplex containing HNE derived (6S,8R,11S) N2-dG cyclic hemiacetal when placed opposite dT Ring-chain tautomerization of trans-4-hydroxynonenal derived (6S,8R,11S) gamma-hydroxy-1,N2-propano-deoxyguanosine adduct when placed opposite 2'-deoxythymidine in duplex Download bibtex for citation iamge Albena Kozekova, Carmelo J Rizzo, Hai Huang, Hao Wang, Michael P Stone, R S LLoyd
17786 Chemical Shifts: 1 set
Structure of the duplex when (5'S)-8,5'-cyclo-2'-deoxyguanosine is placed opposite dT Structures of (5'S)-8,5'-Cyclo-2'-deoxyguanosine Mismatched with dA or dT Download bibtex for citation iamge Ashis Basu, Hai Huang, Michael P Stone, Rajat S Das
17789 Chemical Shifts: 1 set
structure of the duplex containing (5'S)-8,5'-cyclo-2'-deoxyadenosine Structure of (5'S)-8,5'-cyclo-2'-deoxyguanosine in DNA Download bibtex for citation iamge Ashis Basu, Hai Huang, Michael P Stone, Rajat S Das
17788 Chemical Shifts: 1 set
Minor conformer of the DNA-peptide conjugate bridged by trimethylene tether -Hydroxy-1,N2-propano-2'-deoxyguanosine DNA adduct conjugates the N-terminal amine of the KWKK peptide via a carbinolamine linkage. Download bibtex for citation iamge Albena Kozekova, Amanda K McCullough, Carmelo J Rizzo, Hai Huang, Hao Wang, Markus W Voehler, Michael P Stone, R Stephen Lloyd
17787 Chemical Shifts: 1 set
Structure of the duplex when (5'S)-8,5'-cyclo-2'-deoxyguanosine is placed opposite dA Structures of (5'S)-8,5'-Cyclo-2'-deoxyguanosine Mismatched with dA or dT Download bibtex for citation iamge Ashis Basu, Hai Huang, Michael P Stone, Rajat S Das
17746 Chemical Shifts: 1 set
Oligonucleotide duplex contaning (5'S)-8,5'-cyclo-2'-deoxyguansine Structure of (5'S)-8,5'-cyclo-2'-deoxyguanosine in DNA. Download bibtex for citation iamge Ashis K Basu, Hai Huang, Michael P Stone, Rajat S Das
17562 Chemical Shifts: 1 set
N2-dG:N2-dG interstrand cross-link induced by trans-4-hydroxynonenal Formation of a N2-dG:N2-dG carbinolamine DNA cross-link by the trans-4-hydroxynonenal-derived (6S,8R,11S) 1,N2-dG adduct Download bibtex for citation iamge Albena Kozekova, Carmelo J Rizzo, Hai Huang, Hao Wang, Michael P Stone
16223 Chemical Shifts: 1 set
Aflatoxin Formamidopyrimidine alpha anomer in single strand DNA Structural perturbations induced by the alpha-anomer of the aflatoxin B(1) formamidopyrimidine adduct in duplex and single-strand DNA. Download bibtex for citation iamge Constance M Harris, Kyle L Brown, Markus W Voehler, Michael P Stone, Shane M Magee, Thomas M Harris
16226 Chemical Shifts: 1 set
Solution Structure of cis-5R,6S-thymine glycol opposite complementary guanine in duplex DNA The cis-(5R,6S)-thymine glycol lesion occupies the wobble position when mismatched with deoxyguanosine in DNA. Download bibtex for citation iamge Ashis K Basu, Kyle L Brown, Michael P Stone
16225 Chemical Shifts: 1 set
Solution Structure of cis-5R,6S-thymine glycol opposite complementary adenine in duplex DNA Binding of the human nucleotide excision repair proteins XPA and XPC/HR23B to the 5R-thymine glycol lesion and structure of the cis-(5R,6S) thymine glycol epimer in the 5'-GTgG-3' sequence: destabilization of two base pairs at the lesion site Download bibtex for citation iamge Alvin Altamirano, Ashis K Basu, Kyle L Brown, Marina Roginskaya, Michael P Stone, Yue Zou
16222 Chemical Shifts: 1 set
NMR Structure of Aflatoxin Formamidopyrimidine alpha-anomer in duplex DNA Structural perturbations induced by the alpha-anomer of the aflatoxin B(1) formamidopyrimidine adduct in duplex and single-strand DNA. Download bibtex for citation iamge Constance M Harris, Kyle L Brown, Markus W Voehler, Michael P Stone, Shane M Magee, Thomas M Harris