BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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Entry ID Data summary Entry Title Citation Title Authors
21102 Chemical Shifts: 2 sets
Structure of Amphotericin B-Ergosterol Complex Tuning sterol extraction kinetics yields a renal sparing polyene antifungal Download bibtex for citation iamge Agnieszka Lewandowska, Andres S Arango, Anna M SantaMaria, Anuj Khandelwal, Arun Maji, Ashraf S Ibrahim, Brice E Uno, Chad M Rienstra, Charles D Schwieters, Collin G Borcik, Corinne P Soutar, David R Andes, Eman G Youssef, Evgeny Nimerovsky, Ganesh Murhade, Gina Johns, Hiram Sanchez, Jiabao Zhang, Joanna Krise, Jordan T Holler, Justin D Lange, Keith L Bailey, Ken Bartizal, Kieren A Marr, Martin D Burke, Michael J Hageman, Nathan P Wiederhold, Patrick J Roady, Praveen R Juvvadi, Su Yan, Taras V Pogorelov, Teclegiorgis Gebremariam, Thomas F Patterson, Timothy M Fan, William J Steinbach, Yinghuan Lyu, Yogesh Shelke
30828 Chemical Shifts: 1 set
Solution NMR structure of the monomeric form of the cyclic plant protein PDP-23 in CD3CN/H2O A chameleonic macrocyclic peptide with drug delivery applications Download bibtex for citation iamge A S Jayasena, A Song, B F Franke, C D Payne, C Eliasson, C E McAleese, F Hajiaghaalipour, G Vadlamani, J S Mylne, J Zhang, K J Rosengren, M F Fisher, R F Minchin, R J Clark
30827 Chemical Shifts: 1 set
Solution NMR structure of the dimeric form of the cyclic plant protein PDP-23 in H2O A chameleonic macrocyclic peptide with drug delivery applications Download bibtex for citation iamge A S Jayasena, A Song, B Franke, C D Payne, C Eliasson, C E McAleese, F Hajiaghaalipour, G Vadlamani, J S Mylne, J Zhang, K J Rosengren, M F Fisher, R F Minchin, R J Clark
30830 Chemical Shifts: 1 set
Solution NMR structure of the cyclic plant protein PDP-23 in DPC micelles A chameleonic macrocyclic peptide with drug delivery applications Download bibtex for citation iamge A S Jayasena, A Song, B Franke, C D Payne, C Eliasson, C E McAleese, F Hajiaghaalipour, G Vadlamani, J S Mylne, J Zhang, K J Rosengren, M F Fisher, R F Minchin, R J Clark
30829 Chemical Shifts: 1 set
Solution NMR structure of the cyclic plant protein PDP-23 in SDS micelles A chameleonic macrocyclic peptide with drug delivery applications Download bibtex for citation iamge A S Jayasena, A Song, B Franke, C D Payne, C Eliasson, C E McAleese, F Hajiaghaalipour, G Vadlamani, J S Mylne, J Zhang, K J Rosengren, M F Fisher, R F Minchin, R J Clark
30749 Chemical Shifts: 1 set
Spectral_peak_list: 1 set
Solution structure of the seed peptide C2 (VBP-1) from pumpkin Defining the Familial Fold of the Vicilin-Buried Peptide Family Download bibtex for citation iamge Colton D Payne, Grishma Vadlamani, Jingjing Zhang, Joshua S Mylne, K Johan J Rosengren, Mark F Fisher, Richard J Clark
30748 Chemical Shifts: 1 set
Spectral_peak_list: 1 set
Solution structure of vicilin-buried peptide-10 from cucumber Defining the Familial Fold of the Vicilin-Buried Peptide Family Download bibtex for citation iamge Colton D Payne, Grishma Vadlamani, Jingjing Zhang, Joshua S Mylne, K Johan J Rosengren, Mark F Fisher, Richard J Clark
30590 Chemical Shifts: 1 set
Spectral_peak_list: 1 set
Structure of WHB in complex with Ubiquitin Variant Protein engineering of a ubiquitin-variant inhibitor of APC/C identifies a cryptic K48 ubiquitin chain binding site. Download bibtex for citation iamge B A Schulman, C RR Grace, D Haselbach, D J Miller, D L Bolhuis, E R Watson, E T Kulko, H Stark, I F Davidson, J M Peters, J R Prabu, N G Brown, R Vollrath, S S Sidhu, S Yu, W Zhang
30579 Chemical Shifts: 1 set
NMR solution structure of vicilin-buried peptide-8 (VBP-8) An ancient peptide family buried within vicilin precursors. Download bibtex for citation iamge B Pouvreau, C D Payne, H Schaefer, J S Mylne, J Whelan, J Zhang, K J Rosengren, M F Fisher, N L Taylor, O Berkowitz
30580 Chemical Shifts: 1 set
NMR solution structure of vicilin-buried peptide-8 (VBP-8) An ancient peptide family buried within vicilin precursors. Download bibtex for citation iamge B Pouvreau, C D Payne, H Schaefer, J S Mylne, J Whelan, J Zhang, K J Rosengren, M F Fisher, N L Taylor, O Berkowitz
27289 Chemical Shifts: 1 set
Structure of the 30 kDa HIV-1 RNA Dimerization Signal by a Hybrid Cryo-EM, NMR and Molecular Dynamics Approach Structure of the 30 kDa HIV-1 RNA Dimerization Signal by a Hybrid Cryo-EM, NMR, and Molecular Dynamics Approach Download bibtex for citation iamge Carly A Sciandra, David A Case, Jan Marchant, Kaiming Zhang, Michael F Schmid, Michael F Summers, Muyuan Chen, Rossitza N Irobalieva, Sarah C Keane, Steven J Ludtke, Su Zhaoming, Verna Van, Wah Chiu, Xiao Heng
30343 Chemical Shifts: 1 set
Spectral_peak_list: 3 sets
PawL-Derived Peptide PLP-10 (trans conformer) A family of small, cyclic peptides buried in preproalbumin since the Eocene epoch Download bibtex for citation iamge Aleksandra W Debowski, Bahar Behsaz, James Whelan, Jingjing Zhang, Joshua S Mylne, Mark F Fisher, Mark J Howard, Nicolas L Taylor, Oliver Berkowitz, Pavel A Pevzner
30344 Chemical Shifts: 1 set
Spectral_peak_list: 3 sets
PawL-Derived Peptide PLP-10 (cis conformer) A family of small, cyclic peptides buried in preproalbumin since the Eocene epoch Download bibtex for citation iamge Aleksandra W Debowski, Bahar Behsaz, James Whelan, Jingjing Zhang, Joshua S Mylne, Mark F Fisher, Mark J Howard, Nicolas L Taylor, Oliver Berkowitz, Pavel A Pevzner
30341 Chemical Shifts: 1 set
Spectral_peak_list: 4 sets
PawL-Derived Peptide PLP-2 A family of small, cyclic peptides buried in preproalbumin since the Eocene epoch Download bibtex for citation iamge Aleksandra W Debowski, Bahar Behsaz, James Whelan, Jingjing Zhang, Joshua S Mylne, Mark F Fisher, Mark J Howard, Nicolas L Taylor, Oliver Berkowitz, Pavel A Pevzner
30338 Chemical Shifts: 1 set
Spectral_peak_list: 2 sets
PawL-Derived Peptide PLP-4 A family of small, cyclic peptides buried in preproalbumin since the Eocene epoch Download bibtex for citation iamge Aleksandra W Debowski, Bahar Behsaz, James Whelan, Jingjing Zhang, Joshua S Mylne, Mark F Fisher, Mark J Howard, Nicolas L Taylor, Oliver Berkowitz, Pavel A Pevzner
30337 Chemical Shifts: 1 set
Spectral_peak_list: 1 set
PawL-Derived Peptide PLP-12 A family of small, cyclic peptides buried in preproalbumin since the Eocene epoch Download bibtex for citation iamge Aleksandra W Debowski, Bahar Behsaz, James Whelan, Jingjing Zhang, Joshua S Mylne, Mark F Fisher, Mark J Howard, Nicolas L Taylor, Oliver Berkowitz, Pavel A Pevzner
30206 Chemical Shifts: 1 set
Spectral_peak_list: 1 set
Solution structures of Brd2 second bromodomain in complex with stat3 peptide Distinct Roles of Brd2 and Brd4 in Potentiating the Transcriptional Program for Th17 Cell Differentiation Download bibtex for citation iamge A Jaganathan, C Chen, C-H, C Ren, D R Littman, F Zhang, G Lu, H Xiong, J Lee, J-Y, K L Cheung, L Zeng, M H Kaplan, M J Walsh, M R Olson, M Zhou, Q Zhang, R Sharma, T Konuma, T Shen, W Zhang
30186 Chemical Shifts: 1 set
Spectral_peak_list: 1 set
NMR structure of holo-PS1 De novo design of a hyperstable non-natural protein-ligand complex with sub-angstrom accuracy. Download bibtex for citation iamge Alison M Maxwell, David N Beratan, Jeff Rawson, Michael J Therien, Nicholas F Polizzi, Shao-Qing Q Zhang, Thomas Lemmin, William F DeGrado, Yibing Wu
30185 Chemical Shifts: 1 set
Spectral_peak_list: 2 sets
NMR structure of apo-PS1 De novo design of a hyperstable non-natural protein-ligand complex with sub-angstrom accuracy. Download bibtex for citation iamge Alison M Maxwell, David N Beratan, Jeff Rawson, Michael J Therien, Nicholas F Polizzi, Shao-Qing Q Zhang, Thomas Lemmin, William F DeGrado, Yibing Wu
26785 Chemical Shifts: 1 set
APC11 in complex with Ubiquitin Variant Dual RING E3 Architectures Regulate Multiubiquitination and Ubiquitin Chain Elongation by APC/C. Download bibtex for citation iamge Alban Ordureau, Brenda A Schulman, Brian Kuhlman, Christy Grace, Darcie J Miller, David Haselbach, David Yanishevski, Edmond R Watson, Florian Weissmann, Georg Petzold, Holger Stark, Iain F Davidson, Jan-Michael M Peters, Joseph S Harrison, J Wade W Harper, Kuen-Phon P Wu, Marc A Jarvis, Marc W Kirschner, Masaya Yamaguchi, Michael R Brunner, Nicholas G Brown, Peter Y Mercredi, Prakash Dube, Renping Qiao, Ryan VanderLinden, Sachdev S Sidhu, Shanshan Yu, Wei Zhang, Ying Lu
26783 Chemical Shifts: 1 set
APC11 binding Ubiquitin Variant Dual RING E3 Architectures Regulate Multiubiquitination and Ubiquitin Chain Elongation by APC/C. Download bibtex for citation iamge Alban Ordureau, Brenda A Schulman, Brian Kuhlman, Christy Grace, Darcie J Miller, David Haselbach, David Yanishevski, Edmond R Watson, Florian Weissmann, Georg Petzold, Holger Stark, Iain F Davidson, Jan-Michael M Peters, Joseph S Harrison, J Wade W Harper, Kuen-Phon P Wu, Marc A Jarvis, Marc W Kirschner, Masaya Yamaguchi, Michael R Brunner, Nicholas G Brown, Peter Y Mercredi, Prakash Dube, Renping Qiao, Ryan VanderLinden, Sachdev S Sidhu, Shanshan Yu, Wei Zhang, Ying Lu
26784 Chemical Shifts: 1 set
Ubiquitin Variant in complex with APC11 Dual RING E3 Architectures Regulate Multiubiquitination and Ubiquitin Chain Elongation by APC/C. Download bibtex for citation iamge Alban Ordureau, Brenda A Schulman, Brian Kuhlman, Christy Grace, Darcie J Miller, David Haselbach, David Yanishevski, Edmond R Watson, Florian Weissmann, Georg Petzold, Holger Stark, Iain F Davidson, Jan-Michael M Peters, Joseph S Harrison, J Wade W Harper, Kuen-Phon P Wu, Marc A Jarvis, Marc W Kirschner, Masaya Yamaguchi, Michael R Brunner, Nicholas G Brown, Peter Y Mercredi, Prakash Dube, Renping Qiao, Ryan VanderLinden, Sachdev S Sidhu, Shanshan Yu, Wei Zhang, Ying Lu
25627 Chemical Shifts: 1 set
Solution structure of the meiosis-expressed gene 1 (Meig1) Dissecting the structural basis of MEIG1 interaction with PACRG Download bibtex for citation iamge Darrell Peterson, David C Williams, Jerome F Strauss, Junping Liu, Ling Zhang, Maria E Teves, Ninad M Walavalkar, S Bilinovich, Wei Li, William A Buchwald, Zhibing Zhang
25365 Chemical Shifts: 1 set
Backbone 1H, 13C, and 15N Chemical Shift Assignments for drosophila histone mRNA stem-loop-binding protein Molecular mechanisms for the regulation of histone mRNA stem-loop binding protein by phosphorylation Download bibtex for citation iamge Dazhi Tan, Eugene F DeRose, Jun Zhang, Lalith Perera, Liang Tong, Traci Hall, William F Marzluff, Zbigniew Dominski
19891 Chemical Shifts: 1 set
A Mechanism for the cAMP-Dependent Auto-Inhibition of HCN A mechanism for the auto-inhibition of hyperpolarization-activated cyclic nucleotide-gated (HCN) channel opening and its relief by cAMP Download bibtex for citation iamge Bryan VanSchouwen, Eric A Accili, Giuseppe Melacini, Madoka Akimoto, Melanie Gloyd, Oliver F Lange, Rajeevan Selvaratnam, Stephen Boulton, Zaiyong Zhang
19480 Chemical Shifts: 1 set
The Solution Structure of the Regulatory Domain of Tyrosine Hydroxylase The Solution Structure of the Regulatory Domain of Tyrosine Hydroxylase. Download bibtex for citation iamge Andrew P Hinck, Paul F Fitzpatrick, Shengnan Zhang, Tao Huang, Udayar Ilangovan
19171 Chemical Shifts: 1 set
transcriptional repressor domain of methylated DNA binding domain protein 1 Transcriptional repressor domain of MBD1 is intrinsically disordered and interacts with its binding partners in a selective manner. Download bibtex for citation iamge Daiwen Yang, Jackwee Lim, Kunchithapadam Swaminathan, Mariusz A Wasik, Qian Zhang, Umar Farook Shahul F Hameed
18831 Chemical Shifts: 1 set
Solution structure of U14Ub1, an engineered ubiquitin variant with increased affinity for USP14 Conformational dynamics control ubiquitin-deubiquitinase interactions and influence in vivo signaling. Download bibtex for citation iamge Aaron H Phillips, Christian N Cunningham, Christine Tam, Donald S Kirkpatrick, Elizabeth Helgason, Jacob E Corn, James Lee, Jeremy M Murray, Lijuan Zhou, Micah Steffek, Peter S Liu, Wayne J Fairbrother, William F Forrest, Yingnan Zhang
18633 Chemical Shifts: 1 set
solution structure of small molecule-influenza RNA complex, Seattle Structural Genomics Center for Infectious Disease (SSGCID) A novel small-molecule binds to the influenza A virus RNA promoter and inhibits viral replication. Download bibtex for citation iamge Angel Bottini, Byong-Seok Choi, Gabriele Varani, Maurizio Pellecchia, Meehyein Kim, Michael F Bardaro, Mi-Kyung Lee, Ziming Zhang
17097 Kinetic Rates: 1 set
Electrochemical and NMR spectroscopic studies of distal pocket mutants of nitrophorin 2: Stablility, structure, and dynamics of axial ligand complexes Electrochemical and NMR spectroscopic studies of distal pocket mutants of nitrophorin 2: Stability, structure, and dynamics of acial ligand complexes Download bibtex for citation iamge Celia A Balfour, Elizabeth Uno, F A Walker, Hongjun Zhang, Robert E Berry, Tatjana KH Shokhireva
11240 Chemical Shifts: 1 set
Solution structure of the e3_binding domain of dihydrolipoamide branched chaintransacylase Solution structure of the e3_binding domain of dihydrolipoamide branched chaintransacylase Download bibtex for citation iamge F Hayashi, H Zhang, S Yokoyama
11242 Chemical Shifts: 1 set
Solution structure of the first SH3 domain of human vinexin Solution structure of the first SH3 domain of human vinexin Download bibtex for citation iamge F Hayashi, H Zhang, K Izumi, M Yoshida, S Yokoyama
11244 Chemical Shifts: 1 set
Solution structure of the first SANT domain from human nuclear receptor corepressor 1 Solution structure of the first SANT domain from human nuclear receptor corepressor 1 Download bibtex for citation iamge F Hayashi, H Zhang, S Yokoyama
15981 Chemical Shifts: 1 set
Solution NMR Structure of Cgi121 from Methanococcus jannaschii. Northeast Structural Genomics Consortium Target MJ0187 Atomic structure of the KEOPS complex: an ancient protein kinase-containing molecular machine Download bibtex for citation iamge Christophe Fares, Cynthia S Ho, Daniel Durocher, Daniel Y Mao, Dante Neculai, Derek F Ceccarelli, Frank Sicheri, Igor Kurinov, Jenny S Ho, Leo Wan, Michael Downey, Rachel K Szilard, Sigrun Rumpel, Stephen Orlicky, Wei Zhang, Yosr Haffani
15606 Chemical Shifts: 1 set
SOCS box elonginBC ternary complex The SOCS Box Domain of SOCS3: Structure and Interaction with the ElonginBC-Cullin5 Ubiquitin Ligase Download bibtex for citation iamge Alfreda Soetopo, Jeffrey J Babon, Jennifer K Sabo, Jian-Guo Zhang, Micheal F Bailey, Nicos A Nicola, Raymond S Norton, Shenggen Yao
15590 Chemical Shifts: 1 set
Merozoite surface protein 2 in 10 mM HOAc Solution Conformation, backbone dynamics and lipid interactions of the intrinsically unstructured malaria surface protein MSP2 Download bibtex for citation iamge Andrew Low, Christopher G Adda, Matthew A Perugini, Raymond S Norton, Robin F Anders, Shenggen Yao, Vicent J Murphy, Xuecheng Zhang
15564 Chemical Shifts: 1 set
GFT NMR based resonance assignment of membrane proteins: application to subunit c of E. coli F1F0 ATP synthase in LPPG micelles GFT projection NMR based resonance assignment of membrane proteins: application to subunit C of E. coli F(1)F (0) ATP synthase in LPPG micelles Download bibtex for citation iamge Douglas E Kamen, Hanudatta S Atreya, Mark E Girvin, Qi Zhang, Thomas Szyperski
15377 Chemical Shifts: 1 set
Solution structure of human DESR1 Solution structure of human DESR1, a CSL zinc-binding protein. Download bibtex for citation iamge Fangming Wu, F Yang, H Huang, J Sun, J Wu, J Zhang, M Yu, P Ji, W Chu, Y Shi, Z Wu
15075 Chemical Shifts: 1 set
Coupling Constants: 1 set
Merozoite surface protein 2 (MSP2) of Plasmodium falciparum: expression, structure and amyloid formation of the conserved N-terminal domain Merozoite surface protein 2 of Plasmodium falciparum: expression, structure, dynamics, and fibril formation of the conserved N-terminal domain Download bibtex for citation iamge Alfreda Soetopo, Andrew Low, Christopher Adda, Indu R Chandrashekaran, Jennifer Sabo, Raymond S Norton, Robin F Anders, Shenggan Yao, Xuecheng Zhang
6939 Chemical Shifts: 1 set
Backbone 1H, 13C, and 15N Chemical Shift Assignments for Ubiquitin Specific Protease 7 '1H,15N and 13C Assigned Chemical Shifts for USP7 in a complex with an EBNA1 peptide Download bibtex for citation iamge AM Edwards, Cheryl Arrowsmith, F Liao, F Sarkari, F Shire, L Frappier, MN Holowaty, RG Zhang, T Nguyen, V Saridakis, W Lee, Yi Sheng
6555 Chemical Shifts: 1 set
Solution structure of YBL071w-A from Saccharomyces cerevisiae Biochemical and Structural Characterization of a Novel Family of Cystathionine beta-Synthase Domain Proteins Fused to a Zn Ribbon-Like Domain Download bibtex for citation iamge Aled M Edwards, Alexander F Yakunin, Alexei V Savchenko, Alexey G Murzin, Alex Singer, Andrew Binkowski, Andrzej Joachimiak, Cheryl H Arrowsmith, Greg Brown, Jonathan A Lukin, Linda Xu, Michael Proudfoot, Rongguang Zhang, Stephen A Sanders
4941 Chemical Shifts: 1 set
The Three-dimensional Structure of the C-terminal DNA-binding Domain of Human Ku70 The Three-dimensional Structure of the C-terminal DNA-binding Domain of Human Ku70 Download bibtex for citation iamge David J Chen, Donghai Lin, F Chen, Lingyang Zhu, Yuan Chen, Ziming Zhang
4641 Chemical Shifts: 1 set
Coupling Constants: 1 set
Human Prion Protein Mutant E200K Fragment 90-231 Solution structure of Human Prion Protein Mutant E200K Fragment 90-231 Download bibtex for citation iamge F D Soennichsen, M G Zagorski, W K Surewicz, W Swietnicki, Y Zhang
4603 Chemical Shifts: 1 set
Tertiary structure of apo-D-alanyl carrier protein Biosynthesis of D-alanyl-lipoteichoic acid: the tertiary structure of apo-D-alanyl carrier protein Download bibtex for citation iamge B F Volkman, D V Debabov, E Rivera, F C Neuhaus, G Kresheck, Q Zhang
4615 Chemical Shifts: 1 set
Solution Structure of PAFP-S: A new Knottin-type Antifungal Peptide from the seeds of Phytolacca americana Solution Structure of PAFP-S: A new Knottin-type Antifungal Peptide from the seeds of Phytolacca americana Download bibtex for citation iamge D C Wang, G H Gao, J F Wang, J X Dai, W Liu, Y Zhang, Z Hu
bmse500001 : sets
Androstenedione Download bibtex for citation iamge A Guo, A M Weljie, B D Sykes, C Fung, C Knox, D Arndt, D Block, D Cheng, D Clive, D D Hau, D S Wishart, D Tzur, F Bamforth, G Amegbey, G D Macinnis, G E Duggan, H J Vogel, I Forsythe, J Miniaci, J Wagner, K Jeroncic, K Jewell, L Li, L Nikolai, L Querengesser, M A Coutouly, M Clements, M Gebremedhin, M Lewis, N Guo, N Young, P Stothard, P Tang, R Dowlatabadi, R Eisner, R Greiner, S Sawhney, S Shrivastava, T Marrie, Y Zhang